Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02769 ATGGATTATGATTATCAGCTGCTACATGTAGTTGCACTGTTGACACTGATAGCCTTTGGAGGCACAAGTTGGACTATAGAAGCTTGCAGCCCCAACGAATTGGAAGCTTTGATGAGCTTCAAGAATGGAATACAAAAGGACACGTCTGGTCGCGTAGCTAAGTGGATTGGTCAGAGCTGCTGCGATTGGGAAGGAATTGTGTGTGAAAATGCAACCTCTAGAGTGACACAGATCAACCTCCCAGGTTTCATTTCCACAGATACAGATTTATTTCAAACACAAATGAAAGGGTTGATTTCTCCTTCTATAACACTTCTCACCTTTCTTGAAATCATTGATCTTGGTGGCTTAGTTGGTCTTAGTGGAACAATTCCACAAACCATTGGTTTGCACCTGCCAAAGCTACAAAAGCTCTACCTTTATGGCAACAATTTAACTGGTCCAATACCAGAAAGCATTGGAGAGTTGCCAAACCTCCAAGAACTGGCTCTGCAGGAAAATAGGCTATCCGGGTTGATCCCCGTGAGCCTTGGAAGCCTAAAGAGTCTCAAAAGGTTGCTGCTTTATTCAAATCAGTTTTCAGGTACAATACCAGACTCACTTGGGAATTTGATGAATTTGGTAGAATTGGATGTTCATGACAATGCTCTTATTGGTAATATTCCAAATAGTGTTGGTGAGATGCAGGCTTTGGAAAAGCTTGATCTTTCAAACAATTTGTTAAGCGGGAAGATACCTTCTTCATTAACCAATTTAACTGTCATTTCTGTCTTGTACCTGAACACCAATTATCTTGAGGGAACCGTACCATTTCCTTCAAGATCTGGTGAAATGTCTTCTCTGGGCTTCTTAAGACTACACAATAATCTCCTTGTTGGAAATATACCTTCCAATATTGGCTATTTGGTATCTCTTCAAAGAGTTTCATTATCAAACAACAAACTTGAAGGGGCACTGCCATCTAGTTTAGGCAATTTGGTAGCACTGACTGAGTTATATCTCAGTGGTAACTTCTTATCTGACCAAATACCAAAATCAGTGGGCCAACTTTCTCAGCTCATAATGTTGAACATATCTAGAAATTTGATTGAAGGCCCGTTACCCCAAGAGATGTCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTCAACCATCTGAATCTCTCTGCCATTCCAAAATGGATAGAAAACATGTCTTCACTTTCCAACATTTACTTTGCTGGCTGTGGAATACAGGGCCAAATTCCAGATTTTTTCCAAAGAACCAATAGTCCAATACAGGAACTGGACTTGTCAGTGAACTTTCTCAGTGGAAACATACCATCATGGATAGGAAGCCTCAATCAACTCTACAAGTTAAATCTCTCAAGGAACTCTCTTTATTCAGACATCCCTGACTCCTTTAGAAATTTGCAAGATTTAGGGATCCTTGATCTTCACTCAAATAGGCTAGCAGGCACCATAGCTTCAGCATTTGACATACAACAGGGTGTTTTGGGGGGATCATTGAAATTTGTTGATCTTTCTGCTAACAACTTCTCAAGTGGAATTGAGGAAATTGGTGGAGGGCAATGTGGTATTCAGTTTCTGAATTTGTCTCATAACCTTCTGAAAGGTAGGTTACCAAATTCAATTGGAAAACAGAATTCACTTAAAAGTTTGGATTTGAGCTTCAATGAATTAGGCTCCAACTTGCCAGAGGTGCTGGGAAATTTAACCTCATTGGAGAGATTGAAGCTGCAGCAAAATCACTTCACTGGCAAAATTCCAAATGAATTTCTCAAGTTGTTAAAGCTGAAGGAATTAAACTTATCTAACAATCTTCTTGAAGGGGAAATTCCAGAGAGAAAACCTTTGATTGACTTTCCTGAGAGTTCATATTCTGGAAATAAAGGGTTATGTGGAAAGCCCCTCAGTCCTTGTAAAGTTTGA 1935 0.3959 MDYDYQLLHVVALLTLIAFGGTSWTIEACSPNELEALMSFKNGIQKDTSGRVAKWIGQSCCDWEGIVCENATSRVTQINLPGFISTDTDLFQTQMKGLISPSITLLTFLEIIDLGGLVGLSGTIPQTIGLHLPKLQKLYLYGNNLTGPIPESIGELPNLQELALQENRLSGLIPVSLGSLKSLKRLLLYSNQFSGTIPDSLGNLMNLVELDVHDNALIGNIPNSVGEMQALEKLDLSNNLLSGKIPSSLTNLTVISVLYLNTNYLEGTVPFPSRSGEMSSLGFLRLHNNLLVGNIPSNIGYLVSLQRVSLSNNKLEGALPSSLGNLVALTELYLSGNFLSDQIPKSVGQLSQLIMLNISRNLIEGPLPQEMSSLQNLQTLDLSFNHLNLSAIPKWIENMSSLSNIYFAGCGIQGQIPDFFQRTNSPIQELDLSVNFLSGNIPSWIGSLNQLYKLNLSRNSLYSDIPDSFRNLQDLGILDLHSNRLAGTIASAFDIQQGVLGGSLKFVDLSANNFSSGIEEIGGGQCGIQFLNLSHNLLKGRLPNSIGKQNSLKSLDLSFNELGSNLPEVLGNLTSLERLKLQQNHFTGKIPNEFLKLLKLKELNLSNNLLEGEIPERKPLIDFPESSYSGNKGLCGKPLSPCKV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02769 644 Gene3D Ribonuclease Inhibitor 366 644 IPR032675 -
Gma08g02769 644 Pfam Leucine rich repeat 427 485 IPR001611 GO:0005515
Gma08g02769 644 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Gma08g02769 644 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Gma08g02769 644 Gene3D Ribonuclease Inhibitor 30 195 IPR032675 -
Gma08g02769 644 SUPERFAMILY L domain-like 28 269 - -
Gma08g02769 644 SMART LRR_sd22_2 132 158 - -
Gma08g02769 644 SMART LRR_sd22_2 549 568 - -
Gma08g02769 644 SMART LRR_sd22_2 374 401 - -
Gma08g02769 644 SMART LRR_sd22_2 326 352 - -
Gma08g02769 644 SMART LRR_sd22_2 228 254 - -
Gma08g02769 644 SMART LRR_sd22_2 204 223 - -
Gma08g02769 644 Gene3D Ribonuclease Inhibitor 196 271 IPR032675 -
Gma08g02769 644 SUPERFAMILY L domain-like 259 617 - -
Gma08g02769 644 PRINTS Leucine-rich repeat signature 231 244 - -
Gma08g02769 644 PRINTS Leucine-rich repeat signature 374 387 - -
Gma08g02769 644 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Gma08g02769 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 643 - -
Gma08g02769 644 SMART LRR_typ_2 156 179 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 228 252 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 597 619 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 302 325 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 551 573 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 374 399 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 326 350 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 132 154 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 448 471 IPR003591 -
Gma08g02769 644 SMART LRR_typ_2 180 204 IPR003591 -
Gma08g02769 644 Pfam Leucine Rich Repeat 231 252 IPR001611 GO:0005515
Gma08g02769 644 ProSiteProfiles Leucine-rich repeat profile. 599 621 IPR001611 GO:0005515
Gma08g02769 644 Gene3D Ribonuclease Inhibitor 272 365 IPR032675 -
Gma08g02769 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 5 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02769 Gma-Chr8 43513120 43515054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02769 4 644 Receptor kinase-like Gene Family AT4G08850 31.930 6.48e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02769 - - gmx:102670178 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02769 08 43513120 43515054 Gma08g02769 08 43513120 43515054 ECH