Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02755 ATGGCTCTCTCGCGCGTTGTTGCTCAATCGTCGCAATCGAATCTTCTGAAACCCCTAGCGTCGTACTTATCACTACGACGCCGTTCGGTTTCGACTTCGTCAGACCCACTCACGATAGAGACCTCGGTGCCCTTCACCTCCCACAACTGCGACGCGCCGTCACGCGCCGTGGAGACCTCCTCGGCGGAGCTCTTTGCGTTCTTCCACGACATGGCGCTGATGCGGCGGATGGAGATCGCGGCGGACTCGCTCTACAAGGCGAAGCTGATCCGCGGCTTCTGCCACCTCTACGACGGTCAGGAGGCTGTCGCCGTCGGCATGGAGGCCGCCATCACGCGCAAGGACTGCGTCATCACCGCCTACCGCGACCATTGCACCTTCCTCGCCCGTGGCGGAACCCTAATCGAGATCTTCTCCGAGCTCATGGGCCGCCGCGACGGCTGCTCCAAGGGGAAAGGGGGATCCATGCACTTTTATAGGAAGGAAGGTGGCTTCTACGGTGGCCATGGAATCGTTGGGGCGCAGGTTCCGCTTGGGTGTGGCTTGGCTTTTGCTCAGAAGTATTGTAAAGATGAGAATGTTACGTTTTCTATGTACGGTGATGGTGCTGCCAATCAGGGCCAGTTGTTCGAGGCGCTTAACATTTCCGCTCTTTGGGATCTCCCCTCCATTTTGGTCTGCGAGAATAATCACTATGGAATGGGGACAGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTCCTGGATTGAAGGTAGATGGCATGGATGCTCTTGCTGTGAAACAAGCTTGTAAATTTGCAAAGGAGTTTGCTTTGAAGAATGGTCCCATTATTCTTGAAATGGACACATACAGATACCATGGCCACTCCATGTCTGATCCTGGCAGCACATACCGTACACGTGATGAGATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTACTATTGACTCACGAGATTGCTACTGAAAAGGAGCTAAAGGACATTGAAAAGGAAATAAGAAAAGAAGTTGATGAAGCCATTGCCAAAGCAAAGGAAAGTCAAATGCCAGAGCCATCTGATTTATTTACCAATGTATATGTAAAAGGCTTTGGTGTCGAGGCTTGTGGCGCTGATAGGAAAGAAGTTAGAGCTATTTTGCCCTGA 1185 0.5181 MALSRVVAQSSQSNLLKPLASYLSLRRRSVSTSSDPLTIETSVPFTSHNCDAPSRAVETSSAELFAFFHDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCVITAYRDHCTFLARGGTLIEIFSELMGRRDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYCKDENVTFSMYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEFALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLTHEIATEKELKDIEKEIRKEVDEAIAKAKESQMPEPSDLFTNVYVKGFGVEACGADRKEVRAILP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02755 394 Pfam Dehydrogenase E1 component 70 365 IPR001017 GO:0016624
Gma08g02755 394 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 374 IPR017597 GO:0004739|GO:0006086|GO:0043231
Gma08g02755 394 Coils Coil 332 356 - -
Gma08g02755 394 CDD TPP_E1_PDC_ADC_BCADC 67 357 - -
Gma08g02755 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 11 394 - -
Gma08g02755 394 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 53 375 IPR029061 -
Gma08g02755 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 11 394 - -
Gma08g02755 394 Gene3D - 21 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02755 Gma-Chr8 43269557 43280108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02755 1 394 Acyl Lipid Metabolism Gene Families AT1G24180 80.808 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02755 K00161 - gmx:100781250 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02755 08 43269557 43280108 Gma08g02755 08 43269557 43280108 ECH