Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02749 ATGGAGCATCATCACCTAAGACTTATTCTCCTACTCTTGTTCCTGTTCCTACCCAACACCTGCTTCTCTTTCTCATTTCAAACTCCTTCAAGCAATGAATTCTCGAATCAAAGTTCTTCCTCTCTGAAGCAGCAGATTCTGGAGCTAGCTAATAGTCCCAGCACGGTGAAATGGATGAAGAGAATAAGGAGGGAAATCCACGAGCACCCAGAACTTGCATATGAAGAGTTCAGAACAAGTGCTGTCATAAGGCGTGAGCTTGACTTGTTGGGTGTTGAATACAAGTGGCCTGTGGCTGGGACTGGTGTGGTGGCCAAAATTGGTTATGGGTCTCCTCCTTTTGTTGCTCTTAGAGCAGACATGGATGCCTTGCCAATTCAGGAAATGGTTGATTGGGATCATAAGAGCAAAGTAGATGGAAAAATGCATGCTTGTGCACACGATGCACATGTTGCCATGCTACTTGGGGCTGCAAAGATACTGCAAGAAATGAAAGACATGTTACAGACTACTGTTGTTCTAATATTTCAACCAGCTGAGGAAAGAGGCACAGGTGCAAAAGACATGATCCAAGAACAGGTGCTTGAAGATGTTGGTGCTATTCTTGGGTTGCACTTGGGAGCAGAGTATCCGACAGGTGTCGTTGCATCACGGCCAGGAGAATTTTTAGCCGGGTGTGGAAGCTTCGAAGCAAAGATCAAAGGAAAAGGGGGGTTAGCAGGAGTTCCCCAGCATTGTTTTGATCCAGTTTTGGCTGCTTCAACATCAGTGATCAGCTTGCAGAACATTGTTTCAAGGGAGGCTGATCCTTTAGATTCTCAGGTGCTTTCTGTGGCCATGATCAATGCAGGGTCTGCTCATGACATAATCCCTGATTCAGCTACATTTGGAGGTACCTATAGAGCATTCAGTAAAAAGAGCTTCTATGGACTGAGGAAAAGGATAGAAGAGGTTATTAAAGGGCAGGCAGAAGTACATAGGTGCTCTGGAGAGGTTGAGTTCTGTGGCAATGAACATCCCACAATCCCTCCAACCACAAATGATGTGAGAATATACCAACTAGCACGGCAAGTGTCTAGCAAGATTGTTGGAGAAGATAACATAGAATTAGCACCCCTCTTCACAGGGAGTGAAGATTTTGCATTTTACTTGGAAAAGGTACCCGGGTCATTTGTTCTTGTGGGCACACGAAACGAGAAGAGTGGATCCATACATCCTGCTCATAGTCCTTACTTTTTCATTGACGAAGATGTGCTTCCCATTGGGGCTGCATTGCATGCAGCATTTGCTCTTTCATACCATTCATATTCAACAAATTCATACCCTTTGTAA 1332 0.4467 MEHHHLRLILLLLFLFLPNTCFSFSFQTPSSNEFSNQSSSSLKQQILELANSPSTVKWMKRIRREIHEHPELAYEEFRTSAVIRRELDLLGVEYKWPVAGTGVVAKIGYGSPPFVALRADMDALPIQEMVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKDMLQTTVVLIFQPAEERGTGAKDMIQEQVLEDVGAILGLHLGAEYPTGVVASRPGEFLAGCGSFEAKIKGKGGLAGVPQHCFDPVLAASTSVISLQNIVSREADPLDSQVLSVAMINAGSAHDIIPDSATFGGTYRAFSKKSFYGLRKRIEEVIKGQAEVHRCSGEVEFCGNEHPTIPPTTNDVRIYQLARQVSSKIVGEDNIELAPLFTGSEDFAFYLEKVPGSFVLVGTRNEKSGSIHPAHSPYFFIDEDVLPIGAALHAAFALSYHSYSTNSYPL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02749 443 Gene3D - 224 342 - -
Gma08g02749 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 224 343 IPR036264 -
Gma08g02749 443 TIGRFAM amidohydrolases: amidohydrolase 60 422 IPR017439 GO:0016787
Gma08g02749 443 CDD M20_IAA_Hyd 59 433 IPR044757 GO:0009850|GO:0016787
Gma08g02749 443 Gene3D Zn peptidases 61 419 - -
Gma08g02749 443 PIRSF Amidohydrol_AmhX 44 436 IPR017439 GO:0016787
Gma08g02749 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 440 IPR017439 GO:0016787
Gma08g02749 443 SUPERFAMILY Zn-dependent exopeptidases 55 433 - -
Gma08g02749 443 Pfam Peptidase dimerisation domain 225 323 IPR011650 -
Gma08g02749 443 Pfam Peptidase family M20/M25/M40 116 430 IPR002933 GO:0016787
Gma08g02749 443 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02749 Gma-Chr8 43159054 43162801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02749 K14664 - gmx:100780711 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02749 08 43159054 43162801 Gma08g02749 08 43159054 43162801 ECH