Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02710 ATGGCTGATGAGAGCGTTGTTGAGTCCCCAGTGAAGAGGCAGAGAGATGATGGTGAAGAAAATGGTGTCTCTGTTTCCATGGACGCGGAGGGTGGCAAAGACCCTCTTAGTAACGGTTTATCATCTGTGATTCCTGGGTGGTTCTCTGAAATCAGTGCAATGTGGCCTGGAGAGGCTCACTCCTTGAAGGTGGAAAAGATTTTGTTTCAAGGAAAGTCAGAATACCAAAATGTCATGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTGTTTTGGATGGAGTAATTCAGCTAACAGAAAGGGATGAATGTGCCTACCAAGAAATGATCACTCATCTTCCTCTTTGCTCTATTCCAAACCCTAAAAAGGTTTTGGTTATCGGTGGAGGTGATGGAGGGGTCATACGAGAAGTAGCACGCCATTCTTCAGTTGAAAAGATAGACATTTGTGAAATTGACAAGATGGTTGTTGATGTCTCCAAACAATACTTCCCTGATGTAGCTGTTGGGTATGATGATCCTCGTGTGACACTTCATATTGGTGATGGAGTTGCATTTTTGAAGGAAGTTCCAGAAGGAACTTATGATGCTGTTATAGTGGATTCATCCGACCCTATTGGTCCTGCTCAGGAGCTTTTTGAAAAGCCCTTCTTTGCGTCAGTTGCAAAGGCTCTTTGTCCCGGTGGAGTTGTGTGTACTCAGGCAGAAAGCATTTGGCTTCATATGGATATAATTGAGGACATTGTGGCCAATTGTCGCCAGATTTTTAAAGGCTCTGTCAACTATGCTTGGACTACTGTTCCTACATACCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGACCACCTGTTGATTTCAAGCATCCAGTTAATCCCATAGATGAAAATGAGAGTCAGAAGTCAGTAAGACCACTGAAATTTTACAACTCTGAGATTCATACAGCAGCTTTCTGTTTGCCGTCATTTGCAAAGAGGAAGATTAGTTCTAAAGCAAATTAA 1008 0.4286 MADESVVESPVKRQRDDGEENGVSVSMDAEGGKDPLSNGLSSVIPGWFSEISAMWPGEAHSLKVEKILFQGKSEYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVIREVARHSSVEKIDICEIDKMVVDVSKQYFPDVAVGYDDPRVTLHIGDGVAFLKEVPEGTYDAVIVDSSDPIGPAQELFEKPFFASVAKALCPGGVVCTQAESIWLHMDIIEDIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPPVDFKHPVNPIDENESQKSVRPLKFYNSEIHTAAFCLPSFAKRKISSKAN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02710 335 Hamap Polyamine aminopropyltransferase [speE]. 46 331 IPR001045 GO:0003824
Gma08g02710 335 Gene3D Vaccinia Virus protein VP39 98 335 IPR029063 -
Gma08g02710 335 Gene3D Spermidine synthase, tetramerisation domain 39 97 IPR037163 -
Gma08g02710 335 Pfam Spermine/spermidine synthase domain 103 290 - -
Gma08g02710 335 CDD AdoMet_MTases 123 234 - -
Gma08g02710 335 MobiDBLite consensus disorder prediction 1 37 - -
Gma08g02710 335 PIRSF Spermidine_synth 37 335 IPR030668 GO:0006595
Gma08g02710 335 PANTHER SPERMIDINE/SPERMINE SYNTHASE 1 335 IPR001045 GO:0003824
Gma08g02710 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 330 IPR029063 -
Gma08g02710 335 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 124 137 IPR030373 -
Gma08g02710 335 TIGRFAM speE: spermidine synthase 47 325 IPR001045 GO:0003824
Gma08g02710 335 PANTHER SPERMIDINE SYNTHASE-RELATED 1 335 - -
Gma08g02710 335 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 45 282 IPR030374 -
Gma08g02710 335 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g02710 335 Pfam Spermidine synthase tetramerisation domain 46 100 IPR035246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02710 Gma-Chr8 42558476 42566742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02710 K00797 - gmx:100812978 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02710 08 42558476 42566742 Gma08g02710 08 42558476 42566742 ECH