Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02704 ATGAGGCGCATGGCGGTAGGAGCAGTCTCAAACTCCACTCTTTTTCTACCTTCCTCTCTTCTATCTTCTTCTAAACCTAATCCCTTAACTATCCCATTCTCCTTCTATCTCACCAAAACGTCACCGTTTTCCATTTCTGTTCTCACTCGCCAACGCCGCTTCCTTTCCGTTTCTTCTTTAACCGCTGACCACCACAACCTCTCTGATTTCGGAGATGGTGACAGCGTTGCAATTTCAAACGAAGGTTTGAAGATGCTTCTCAAAGGGATGACTTATCCAGAACTTGAAAAATGGGTTCAATCACATGGATACAGGCCTGGGCAGGCTATGATGTTATGGAAGCGAATGTATGGAAACAACATTTGGGCCCATCATATTGATGAGTTGGAAGGTTTGAATAAAGATTTCAAGAAAATGTTGAATGAAAATGCCGAGTTCAAAGCGCTTACTCAGAAAGAAATTCGCACAGCATCTGATGGAACAAGAAAGATTTTATTCACATTGGAAGATGGGCTGGTCATAGAAACAGTTGTCATACCTTGTGACAGAGGTAGGACTACTGTGTGTGTTTCAAGTCAAGTTGGATGTGCTATGAATTGTCAATTTTGCTACACTGGAAGGCAAGCCTTAATGGGTCTTAGGAGACATCTTACTGCTGCAGAAATAGTAGAGCAGGCTGTTTTTGCCAGACGGCTGCTCACTGATGAAGTTGGTTCCATTACAAATGTTGTCTTTATGGGCATGGGGGAACCACTTCATAACATTGATAATGTCATTAAAGCTGCAGATATAATGGTGGATGAGCAAGGGCTTCAGTTCAGTCCCCGCAAGGTCACCATTTCAACCAGCGGGCTTGTTCCACAGCTTAAACGTTTCCTCCATGAATCAAACTGTGCATTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTAAGAAACTGGATCATGCCTATAAATCGAAAGTACAAGCTGGAGTTGCTTCTTCAGACACTTCGAGAGGAGCTTTGCTTCAAAAAGAACTACAAAGTTCTATTTGAGTATGTGATGCTTGAAGGAGTTAATGACAGCGATGGAGATGCAGAGAGGCTTATCGAGCTTGTGAAGGGAATTCCTTGCAAGATTAATCTTATCTCATTCAATCCACACAGTGGATCATTCTTCAAACCAACCAAAGATGAAAGAATGATTGAATTCCGGAATACATTGGCTGGTGCAGGATTGGTAGTCATTTTAAGACTTAGTAGAGGTGATGATCAAATGGCTGCCTGTGGTCAATTGGGTAAGCCTGGCACCATTCAAGCTCCATTGCTTCGTGTACCAGAGCAATTCCAAATGGCAATTGGAAGTTCAGCTTGA 1356 0.4255 MRRMAVGAVSNSTLFLPSSLLSSSKPNPLTIPFSFYLTKTSPFSISVLTRQRRFLSVSSLTADHHNLSDFGDGDSVAISNEGLKMLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELEGLNKDFKKMLNENAEFKALTQKEIRTASDGTRKILFTLEDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRQALMGLRRHLTAAEIVEQAVFARRLLTDEVGSITNVVFMGMGEPLHNIDNVIKAADIMVDEQGLQFSPRKVTISTSGLVPQLKRFLHESNCALAVSLNATTDEVRNWIMPINRKYKLELLLQTLREELCFKKNYKVLFEYVMLEGVNDSDGDAERLIELVKGIPCKINLISFNPHSGSFFKPTKDERMIEFRNTLAGAGLVVILRLSRGDDQMAACGQLGKPGTIQAPLLRVPEQFQMAIGSSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02704 451 CDD Radical_SAM 195 385 - -
Gma08g02704 451 TIGRFAM rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 87 427 IPR027492 GO:0030488|GO:0070475
Gma08g02704 451 Pfam 4Fe-4S single cluster domain 195 301 - -
Gma08g02704 451 Gene3D Aldolase class I 148 432 IPR013785 -
Gma08g02704 451 SFLD Radical SAM 85 428 IPR007197 GO:0003824|GO:0051536
Gma08g02704 451 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 66 434 - -
Gma08g02704 451 Pfam Radical SAM superfamily 191 357 IPR007197 GO:0003824|GO:0051536
Gma08g02704 451 PANTHER 23S RRNA METHYLTRANSFERASE 66 434 IPR040072 -
Gma08g02704 451 SFLD adenosine C2 methyltransferase (RlmN-like) 85 428 IPR004383 GO:0006364|GO:0008173
Gma08g02704 451 Gene3D - 84 147 - -
Gma08g02704 451 SUPERFAMILY Radical SAM enzymes 184 407 - -
Gma08g02704 451 ProSiteProfiles Radical SAM core domain profile. 182 418 IPR007197 GO:0003824|GO:0051536
Gma08g02704 451 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02704 Gma-Chr8 42392355 42398683 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02704 K06941 - gmx:100813692 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02704 08 42392355 42398683 Gma08g02704 08 42392355 42398683 ECH