Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02686 ATGGCGGATTCTGCAGATGTCACCCACGATGTTGTGTCCCTCCTCTCTTCTCCTCAAAGGGACTTTCTTCTTCGAAACAACGGCGATCAGGTTAAAATTGACAGCTTGAAGGGTAAGAAACTTGGTTTGTATTTTTCGGCATCCTGGTGTGGTCCATGTCAAACATTTACGCCAACTTTGGTGGATGTGTACAATGAGGTTGCAAAAAAAGGTGACTTCCAGATCGTTTTCATTACGGCTGATGAAGATGATGAGTCCTTTAACGGTTACTTTTCCAAGATGCCATGGCTTGCAATCCCATTTTCTGATTCAGACACACGCAGCCGCCTTGATGAATTGTTTCATGTGAGGGGGATTCCCCATCTTGCATTACTTGATGAAGCTGGCAATGTTGTCACTGAAGATGGAGTTGATGTTATACGCGAATACGGTGTTGAAGGATACCCGTTTACATCAGCAAGGATCCAAGAGTTGAGAGATCAAGAAGAGGAAGCTAGGAGGAACCAGTCCGTGAGATCTCTCTTGGTCTCTCCATCTCGGGACTTCGTAATATCATCTGATGGAAAGAAAACACTTGTCTCTGAGCTTGAGGGCAAGACAGTTGGTCTGTATTTCTGCGTGAAGTCATTCGGATCATGCAGTGACTTTACCCCAAAGCTTGTGGAGGTTTATGAGAAGCTGAAGGCCCAGGGGGAGAACTTTGAGGTTGTGCTGATACCCCTAGATGATGATGAAGAGTCATTCAAGGAACTATTAGAAAGTGTGCCTTGGTTATCCTTGCCTTTCAAGGACAAAATCTGTGGGAAGCTAGCTCGGTACTTCGAGCTTTCAACCCTCCCCACTTTGGTTATTATTGGACCAGATGGGAAAACTCTTCATTCTAATGTTGCTGAGGCAATTGAGGATCATGGGGTTGCTGCATACCCATTCACCCCTGAAAAGTTTGCTGAGCTTGATGAAATACTGAAGGCCAAAGAGGCAGCTCAAACCCTTGAGTCAATTTTGGTGTCTGACGATCAAGATTTTGTCATTGGGAAAGATGGGGTGAAGATTCCAGTGTCAGAATTGAAGGGGAAGGTTGTCCTCCTCTACTTCTCAGCTCACTGGTGTCCTCCATGCCGTGCATTCCTTCCAAAACTTATTGATGCATATAATAAGATTAAGGAAAAGGGCAATGCATTAGAAGTTGTTTTCATCTCAAGTGACAGAGATCAAACCTCCTTTGATGAATTCTTTGCGGGAATGCCATGGTTGGCACTTCCCTTTGGGGACTCGAGGAAGAAATTCCTGAGTCGCAAATTCAGGGTATCTGGCATCCCCATGCTTGTGGCCATTGCATCAAGTGGTCAGACATTGACAACAAAAGCTCGAGATCTGGTTTCACTCTATGGAGCAGATGCATATCCTTTCACCGAGGAGAGAATAAAAGAAATAGAGACAGAACAAGAAGAGACTGCAAAGGGGTGGCCGGAGAAGCTGAAGCATGAATTACATGAGCATGAGCTTGTGTTGACGCGCCGCAGGGTGTATTACTGTGATGCTTGCAATGAAGAGGGACATATATGGTCCTACTACTGTGGAGATTGTGACTTTGATCTCCATCCAAAATGTGCATTGGAAAAGGAGGACAAAGAAGGAAGCAAAGATGATGCCAAGGAAGAAAAGTCCAAAGATGAATGGGTTTGTGATGGAGAAGTCTGCAAAAAAGCCTAA 1713 0.4483 MADSADVTHDVVSLLSSPQRDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCQTFTPTLVDVYNEVAKKGDFQIVFITADEDDESFNGYFSKMPWLAIPFSDSDTRSRLDELFHVRGIPHLALLDEAGNVVTEDGVDVIREYGVEGYPFTSARIQELRDQEEEARRNQSVRSLLVSPSRDFVISSDGKKTLVSELEGKTVGLYFCVKSFGSCSDFTPKLVEVYEKLKAQGENFEVVLIPLDDDEESFKELLESVPWLSLPFKDKICGKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEDHGVAAYPFTPEKFAELDEILKAKEAAQTLESILVSDDQDFVIGKDGVKIPVSELKGKVVLLYFSAHWCPPCRAFLPKLIDAYNKIKEKGNALEVVFISSDRDQTSFDEFFAGMPWLALPFGDSRKKFLSRKFRVSGIPMLVAIASSGQTLTTKARDLVSLYGADAYPFTEERIKEIETEQEETAKGWPEKLKHELHEHELVLTRRRVYYCDACNEEGHIWSYYCGDCDFDLHPKCALEKEDKEGSKDDAKEEKSKDEWVCDGEVCKKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02686 570 CDD TryX_like_TryX_NRX 341 470 IPR045870 GO:0004791
Gma08g02686 570 ProSitePatterns Thioredoxin family active site. 362 380 IPR017937 -
Gma08g02686 570 ProSiteProfiles Thioredoxin domain profile. 325 480 IPR013766 -
Gma08g02686 570 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Gma08g02686 570 Gene3D Glutaredoxin 15 152 - -
Gma08g02686 570 Gene3D Glutaredoxin 331 471 - -
Gma08g02686 570 Gene3D Glutaredoxin 174 311 - -
Gma08g02686 570 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 539 - -
Gma08g02686 570 PANTHER THIOREDOXIN 4 539 - -
Gma08g02686 570 ProSiteProfiles Thioredoxin domain profile. 171 324 IPR013766 -
Gma08g02686 570 ProSiteProfiles Thioredoxin domain profile. 13 164 IPR013766 -
Gma08g02686 570 SUPERFAMILY Cysteine-rich domain 489 539 IPR046349 -
Gma08g02686 570 Pfam Thioredoxin-like 358 450 IPR012336 -
Gma08g02686 570 Pfam Thioredoxin-like 39 131 IPR012336 -
Gma08g02686 570 Pfam Thioredoxin-like 198 290 IPR012336 -
Gma08g02686 570 CDD TryX_like_TryX_NRX 21 150 IPR045870 GO:0004791
Gma08g02686 570 Pfam C1 domain 497 538 IPR004146 -
Gma08g02686 570 SUPERFAMILY Thioredoxin-like 184 293 IPR036249 -
Gma08g02686 570 SUPERFAMILY Thioredoxin-like 344 452 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02686 Gma-Chr8 42074766 42079038 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02686 K17609 - gmx:100809224 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02686 08 42074766 42079038 Gma08g02686 08 42074766 42079038 ECH