Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02682 ATGGCGGAGAACAACAACAACCACCACCTTGAAACCGCCACCAGAAGGCTTGCCTCTGTGACCAACCACCTCACTCCTTCTTCTTATCACAACGCACCCGGCGAACTCGCCCCGTGCCTCACTTCCGGTGGGAACAACAGCTTCCGCCGCGTCCACGGAGAAGTTCCATCCCACGACGTCGTTTGGAGGATCGTCGCCTCCGACCACGACAACTCCGGCAAGGACTTCACCGACATTGTCTACGAGAAGGCCGTCGGGGAAGGAATAGCCAAGATAAGTATTAATAGGCCAGAGAGAAGGAATGCGTTCCGACCCCACACGGTGAAGGAGCTTATGCGTGCTTTCACTGATGCCAGGGATGATAGCTCTATTGGGGTCGTCATTCTCACTGGCAAGGGAACCGAAGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGGACTAACGATGGCTATTCTGATAATGGAAGTTTCAGTAGCCTTAATGTGTTAGACTTGCAGGTGCAGATACGCCGCCTCCCTAAACCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGGCATGTATTGCATATGGTCTGTGATCTAACTATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCCAAGGTTGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCCCGTTTGGTAGGTCCAAAAAAAGCACGTGAAATGTGGTTTCTCACAAGGTTCTATGATGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCACTTGAGAATTTAGAGAAGGAAACGATAAAATGGTGTCGGGAGATACTGAGGAACAGTCCAACTGCTATTCGGGTACTCAAGTCAGCTCTTAATGCAGTGGATGATGGACATTCCGGACTTCAGGAAATTGGTGGAAATGCAACACTGATATACTATGGCACTGAGGAAGCTAAAGAGGGCAAGACTGCATATATGCAACGTAGACGGCCTGATTTTTCTAAGTTCAATCGGCGACCTTAA 1020 0.4892 MAENNNNHHLETATRRLASVTNHLTPSSYHNAPGELAPCLTSGGNNSFRRVHGEVPSHDVVWRIVASDHDNSGKDFTDIVYEKAVGEGIAKISINRPERRNAFRPHTVKELMRAFTDARDDSSIGVVILTGKGTEAFCSGGDQALRTNDGYSDNGSFSSLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYDAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHSGLQEIGGNATLIYYGTEEAKEGKTAYMQRRRPDFSKFNRRP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02682 339 Gene3D - 279 327 IPR014748 -
Gma08g02682 339 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 177 197 IPR018376 GO:0003824
Gma08g02682 339 Gene3D - 60 278 - -
Gma08g02682 339 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 62 338 IPR010198 GO:0008935|GO:0009234
Gma08g02682 339 TIGRFAM menB: naphthoate synthase 76 335 IPR010198 GO:0008935|GO:0009234
Gma08g02682 339 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 11 339 IPR010198 GO:0008935|GO:0009234
Gma08g02682 339 CDD crotonase-like 79 275 - -
Gma08g02682 339 Pfam Enoyl-CoA hydratase/isomerase 87 333 IPR001753 GO:0003824
Gma08g02682 339 SUPERFAMILY ClpP/crotonase 75 334 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02682 Gma-Chr8 42032149 42036969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02682 1 339 Acyl Lipid Metabolism Gene Families AT1G60550 75.294 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02682 K01661 - gmx:100807101 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02682 08 42032149 42036969 Gma08g02682 08 42032149 42036969 ECH