Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02677 ATGCCGCGGCCGTGGACCGGGAAGGCGCCGCTGAAGGGCAAGAAGAGCAAGAAGGTTCCGCTCTTCGACTCGTTCAATCCCCCGCCGGCCGGCACCAAGGGCGTGAAGCTCGTGGAGATGCCCGGGCCGTTTCCCATGGGGCAGTTTCCGCTAGAGGGGAAGAGCAGGGAGGAGATTCTCGGAGAGCCTCTGAAGAAGTGGGAGATACATATGCTGGTTAAGCCCATGATGTCTTACAATCGCCAGGTTAATCTTGGAAGGGATGGATTAACGCATAACATGCTGGAGTTGATACATTCACATTGGAAGCGTCGCCGAGTCTGTAAAATTCGTTGTTTAGGTGTTCCAACTGTAGATATGGATAATGTTTGCCATCATATTGAGGAGAAAACAGGGGGGAAAATAATTCATCGGGTTGGTGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTATAGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTACCCAAAACTTATACAGGATGCTCCAGGAGGATTAACAAAAGATGAAGCTGATGAATTACGGATGAAGGGGAAAAGCCTGTTACCAATATGTAAATTAGCCAAAAATGGAGTATATACATCCCTTGTAAAGGATGTCAGAGATGCTTTTGAAGGAAGTATTTTGGTGAAAATTAACTGCAAGGGATTGGATCCTAGTGATTACAAGAAAATAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTGTTGTCTTTTGATGATGAACAGATATTGATGTGGAGGGGCAAAGACTGGAAATCAAGGTACCCACAACCTCTGCCAGTTTTTACGCCTTCAAAAGCTAACATTGTTGGGAATTTGGAAAATTCAGGTGAGACTGACGACAATCAATACAAGCATGATGGCAACATGGTGAACACGAGCCCAAAAATGTTGTCTCTGTGGAAGCGTGCAATCCAGTCAAGCAAAGCTTTGTTGCTGGATGAGTTTAATCTCGGTCCTGATGCTCTCTTGGAGAAGGTAGAGGAATTTGACACTGTTTCACAGGCCTTGGAGCACTCCCATCCAGCATTTAGTTTGTCAAGTAAAGAAAATGATGCTGAAGGTTCATCtgcaaactttgaaaatagttattctagtgatggcttacatactgaagaggattatgcaaagttcgaagatagttattctagtgatgccttacaaactgaagaggaagaggaagaggaagaggatgaggatgaggatgaggatgaggaCTACTATGATGATGAAGACGATGACTTGTATGCGGTGGACACATCGGCTCAACCCGGATCATTACCTGTTGATATGATTGTCAAAAAGCTAAAACAAAGACCATTGGAGTAA 1383 0.4049 MPRPWTGKAPLKGKKSKKVPLFDSFNPPPAGTKGVKLVEMPGPFPMGQFPLEGKSREEILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDAPGGLTKDEADELRMKGKSLLPICKLAKNGVYTSLVKDVRDAFEGSILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRYPQPLPVFTPSKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSLWKRAIQSSKALLLDEFNLGPDALLEKVEEFDTVSQALEHSHPAFSLSSKENDAEGSSANFENSYSSDGLHTEEDYAKFEDSYSSDALQTEEEEEEEEDEDEDEDEDYYDDEDDDLYAVDTSAQPGSLPVDMIVKKLKQRPLE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02677 460 ProSiteProfiles CRM domain profile. 62 158 IPR001890 GO:0003723
Gma08g02677 460 MobiDBLite consensus disorder prediction 1 25 - -
Gma08g02677 460 SUPERFAMILY YhbY-like 63 156 IPR035920 -
Gma08g02677 460 Gene3D - 63 159 IPR035920 -
Gma08g02677 460 SMART CRS1_YhbY_2 182 265 IPR001890 GO:0003723
Gma08g02677 460 SMART CRS1_YhbY_2 64 147 IPR001890 GO:0003723
Gma08g02677 460 MobiDBLite consensus disorder prediction 403 435 - -
Gma08g02677 460 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 1 456 - -
Gma08g02677 460 ProSiteProfiles CRM domain profile. 180 276 IPR001890 GO:0003723
Gma08g02677 460 MobiDBLite consensus disorder prediction 359 443 - -
Gma08g02677 460 Pfam CRS1 / YhbY (CRM) domain 66 147 IPR001890 GO:0003723
Gma08g02677 460 Pfam CRS1 / YhbY (CRM) domain 182 265 IPR001890 GO:0003723
Gma08g02677 460 MobiDBLite consensus disorder prediction 359 384 - -
Gma08g02677 460 Gene3D - 182 277 IPR035920 -
Gma08g02677 460 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 1 456 IPR044599 GO:0000373
Gma08g02677 460 SUPERFAMILY YhbY-like 182 273 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02677 Gma-Chr8 41905332 41915153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02677 - - gmx:100801953 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02677 08 41905332 41915153 Gma08g02677 08 41905332 41915153 ECH