Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02675 ATGGAACATTTGGAGCAATGGAAACAACAATTTCTCCGGTGGTGGCGCGTCGCAGTCCACACCGTCCCCCCAATTCAGCTCTACGCCGTCGCCGCCGTCCTTATCCTCACCACCGTTCTCCTTCTCTCAATTCGCTTCTTGAAGCGCGCAAAGTCCAACACCATTGTTCTCACTGGCCTCTCCGGCGCCGGCAAAACTGTCCTCTTCTACCAACTTAGGGATGGTTCTATCCACGAGGGTACCGTTACGTCCATGGAACCTAACGAGGACACTTTCCTTCTTCATTCTGAAACAGTCCCGAAGCGCAAGGTGAAACCTGTTTGTGTTGTTGATGTTCCGGGACATTCGCGGCTTCGGCCCAAGCTGGATGAGTACTTGCCCAAGGCTGCTGCCATTGTGTTTGTTGTTGATGCTGTGGACTTCTTACCGAATTGTCGTGCTGCTTCAGAGTATCTGTATGATATATTGACCAAGGGAAGTGTCGTGAGGAAGAAGATTCCGTTACTTATTCTCTGCAACAAAACGGACAAAGTCACTGCTCATTCCAAGGAGTTCATCGGCAAACAGATGGGGAAGGAAATTGACAAATTACGGGAATCAAGAAGTGCAATATCACCAGCTGACATTGCAAATGAGTTCAACCTTGGGGTACCTGGAGAACCATTTTCTTTCACCCAGTGCCCTAACAAAGTTAGACTTCAAGATGCTTCTGGTCTTACAGGGGAGATCTCTCAGTTAGAACAGTTTATCAGAGAATATGTGAAGCCTTAG 771 0.4838 MEHLEQWKQQFLRWWRVAVHTVPPIQLYAVAAVLILTTVLLLSIRFLKRAKSNTIVLTGLSGAGKTVLFYQLRDGSIHEGTVTSMEPNEDTFLLHSETVPKRKVKPVCVVDVPGHSRLRPKLDEYLPKAAAIVFVVDAVDFLPNCRAASEYLYDILTKGSVVRKKIPLLILCNKTDKVTAHSKEFIGKQMGKEIDKLRESRSAISPADIANEFNLGVPGEPFSFTQCPNKVRLQDASGLTGEISQLEQFIREYVKP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02675 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 188 IPR027417 -
Gma08g02675 256 Gene3D - 47 254 IPR027417 -
Gma08g02675 256 ProSiteProfiles small GTPase Arf family profile. 46 250 - -
Gma08g02675 256 CDD SR_beta 53 253 IPR019009 -
Gma08g02675 256 Pfam Signal recognition particle receptor beta subunit 51 231 IPR019009 -
Gma08g02675 256 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 256 IPR019009 -
Gma08g02675 256 SMART arf_sub_2 34 231 - -
Gma08g02675 256 PANTHER TRANSFERRIN 4 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02675 Gma-Chr8 41897100 41899615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02675 5 256 Miscellaneous Gene Families AT5G05670 67.984 1.38e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02675 K12272 - gmx:100804789 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02675 08 41897100 41899615 Gma08g02675 08 41897100 41899615 ECH