Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02506 GCAAAAGATGCTGCTTCTGTGCAGAACAAATGGTTGTTGGTGAACATACAATCTACCAAGGAATTCAGCTCGCATATGCTTAACCGGGATACGTGGGCCAATGAAGCTGTTTCTCAGACTATTAGTACAAACTGCATATTCTGGCAGGTATATGATGATACAACTGAAGGCAGAAAAGTTTGCACTTATTACAGACTGGATTCAATTCCTGTCGTACTTGTTATTGATCCCATCACTGGCCAAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAAGGTCTACTAGCATTCCTTGATGCAGGGCCTAAGGACCATCATATTACCTTGTCTCACAAGCGTCCTAGAGGAAGTTCTAGCCCACCAAAATCTAAAGCCTTGGTAGAATCAGATGAGAATAAAGAGGAGGATGAGGAAGTTCAAAGAGCTCTAGCTGCTTCTATGGAGAGCATGAAAGAATCAACTGTTATGACTGGAAGAGACAATATAGATACAGACGTTGCAGTCTATGGACAACAAACAACCTTGGCTAAGAGACCCATATATCCAGCCCTGCCTGAAGAACCCAAGGTTGAAAGAAATCTCCTATGCAGGGTTGGTGTTCGTCTTCCAGATGGACACCGGATTCAGCGTAACTTCTTACGCACTGATCCAATTCAGCTGCTGTGGTCTTTCATTTCTGCTCAACTAGGGGAAGATGAAAGAAAGCCATTTAGATTAACACATGCAATTCCTGGAGCATCTAAAATTCTGGACTATGAAAGTAATTCAACCTTCCAGGAATCAGGCCTTGCGAACTCTATGATTTCGGTGACTTGGGACTGA 837 0.4313 AKDAASVQNKWLLVNIQSTKEFSSHMLNRDTWANEAVSQTISTNCIFWQVYDDTTEGRKVCTYYRLDSIPVVLVIDPITGQKMRSWIGMVQPESLLEGLLAFLDAGPKDHHITLSHKRPRGSSSPPKSKALVESDENKEEDEEVQRALAASMESMKESTVMTGRDNIDTDVAVYGQQTTLAKRPIYPALPEEPKVERNLLCRVGVRLPDGHRIQRNFLRTDPIQLLWSFISAQLGEDERKPFRLTHAIPGASKILDYESNSTFQESGLANSMISVTWD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02506 278 ProSiteProfiles UBX domain profile. 196 276 IPR001012 GO:0005515
Gma08g02506 278 CDD UAS 1 105 - -
Gma08g02506 278 CDD UBX 202 276 - -
Gma08g02506 278 Gene3D - 193 276 - -
Gma08g02506 278 SUPERFAMILY Thioredoxin-like 1 110 IPR036249 -
Gma08g02506 278 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 139 158 IPR003903 -
Gma08g02506 278 Pfam Thioredoxin-like 1 77 - -
Gma08g02506 278 Gene3D Glutaredoxin 1 106 - -
Gma08g02506 278 MobiDBLite consensus disorder prediction 111 142 - -
Gma08g02506 278 Pfam UBX domain 201 271 IPR001012 GO:0005515
Gma08g02506 278 SUPERFAMILY Ubiquitin-like 187 277 IPR029071 -
Gma08g02506 278 SMART 45neu3 1 104 IPR006577 -
Gma08g02506 278 PANTHER FAS-ASSOCIATED PROTEIN 1 278 - -
Gma08g02506 278 PANTHER UBX DOMAIN-CONTAINING PROTEIN 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02506 Gma-Chr8 36721646 36736826 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02506 K24350 - gmx:100780532 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02506 08 36721646 36736826 Gma08g02506 08 36721646 36736826 ECH