Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02472 ATGAAGTACGTGCTGGTGACTGGTGGAGTTGTTAGTGGCCTTGGCAAAGGTGTTACTGCGAGTAGTATTGGTTTGCTTCTCAAAGCTTGTGGACTTAGAGTTACTGCCATTAAAATTGATCCTTACTTAAACACAGATGCTGGAACAATGTCCCCCTTTGAGCATGGAGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACCTGGATCTTGGAAACTATGAGCGTTTTATGGACATCAAGTTGACCCGTGATAATAACATAACTACTGGGAAGATTTACCAGTCTGTCATTGACAAAGAGAGGAGAGGAGACTATTTGGGAAAAACTGTTCAGGTTGTCCCTCATATCACTGATGCTATTCAAGATTGGATTGAAAGAGTGGCCCACATACCTGTAGATGGAAAGACCAGTCCAGCTGATGTATGTGTCATAGAATTGGGTGGAACCATAGGAGATATTGAGTCCATGCCATTTATTCAGGCATTAGGACAATTCTCATACAGAGTAGGTGCTGGCAACTTTTGCTTAGTTCATGTCAGCCTTGTTCCTGTTTTGAATGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCATAGTGTTCGTGCACTGCGTGGCCAAGGGCTGACTCCACATATCTTAGCATGCCGCAGCACTATGGTACTGGATGAGAATGCAAAGGGAAAACTCTCTCAATTTTGCCTAATTCCGGCAGAAAACATTGTTACCCTTTATGATGTTCCCAACATCTGGCACATTCCTTTGCTTTTAAGAGATCAGAAGGCACATGAAGCAATGTTTAAAGTGCTGAACCTTCATGGTGTAACTAAAGAGCCTAATTTAGAGGAATGGACTTGCAGAGCTGAATCTAGTGATTTGCTTCATGAACCAGTTCGTATAGCCTTAGTGGGGAAATATACGTGCCTTTCAGATTCCTACCTCTCCGTTCTAAAGGCCTTACTGCATGCTTCTGTTGATTGCCAAAAGAAACTTGTTGTGGACTGGATTCCAGCTAGCAACCTTGAAAGTGCAACTGCAAAAGAGAATCCTGATGCTTTTAAGGCAGCATGGAAGTTATTAAAGGGTGCAGATGGTGTTCTTGTTCCTGGAGGGTTTGGAGATAGAGGAGTGCAAGGAAAAATTATTGCAGCCAAATATGCCCGTGAAAACAGGATTCCATTCCTTGGCATTTGTCTTGGAATGCAGATTGCTGTCATAGAGTTTGCACGATCTGTTCTTGGTGTACAAGATGCTAACAGCACTGAATTTGAGCCCCATACCAAAAGTCCATACATCATATTTATGCCTGAGGGATCAAAAACACATATGGGAGGCACCATGCGCCTTGGATCTAGGAGGACATATTTCCAGACCAAGGAATGCAAATCTGCAAAATTATATGGCTGCAAAAGCTTCATTGATGAGAGACATCGGCATAGATATGAGGTGAATCCGGATTTAGTGGCACGCCTTGAAAATGCTGGTCTTTCTTTTACTGGAAAGGATGAAACAGGTCAACGCATGGAGATTGTTGAACTACCTAACCATCCTTATTTTATCGGTGCTCAATTCCATCCTGAATTTAAATCAAGACCAGGAAAACCTTCTCCTTTGTTCTTAGGATTCATTGGAGCAGCATGTGGACAATTGGATGCTGTCTTACAGCGCTCTTCAATTGTTGATAATGGTCTCTCAAAAGGAGTCATTAATGATATCTCTGCAGTCAAAACATACCGAACAAGAACCGCTACAAGGACAACTTATAGGTCTGCTGAATATGTATATGGGAGTTGCAATGGATTGCATTTCTAA 1812 0.4238 MKYVLVTGGVVSGLGKGVTASSIGLLLKACGLRVTAIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERRGDYLGKTVQVVPHITDAIQDWIERVAHIPVDGKTSPADVCVIELGGTIGDIESMPFIQALGQFSYRVGAGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRALRGQGLTPHILACRSTMVLDENAKGKLSQFCLIPAENIVTLYDVPNIWHIPLLLRDQKAHEAMFKVLNLHGVTKEPNLEEWTCRAESSDLLHEPVRIALVGKYTCLSDSYLSVLKALLHASVDCQKKLVVDWIPASNLESATAKENPDAFKAAWKLLKGADGVLVPGGFGDRGVQGKIIAAKYARENRIPFLGICLGMQIAVIEFARSVLGVQDANSTEFEPHTKSPYIIFMPEGSKTHMGGTMRLGSRRTYFQTKECKSAKLYGCKSFIDERHRHRYEVNPDLVARLENAGLSFTGKDETGQRMEIVELPNHPYFIGAQFHPEFKSRPGKPSPLFLGFIGAACGQLDAVLQRSSIVDNGLSKGVINDISAVKTYRTRTATRTTYRSAEYVYGSCNGLHF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02472 603 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Gma08g02472 603 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Gma08g02472 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Gma08g02472 603 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Gma08g02472 603 PANTHER CTP SYNTHASE 1 569 IPR004468 GO:0003883|GO:0006221
Gma08g02472 603 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Gma08g02472 603 Pfam Glutamine amidotransferase class-I 309 543 IPR017926 -
Gma08g02472 603 Gene3D - 295 561 IPR029062 -
Gma08g02472 603 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Gma08g02472 603 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Gma08g02472 603 Gene3D - 1 291 IPR027417 -
Gma08g02472 603 PANTHER CTP SYNTHASE 1 569 - -
Gma08g02472 603 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02472 Gma-Chr8 32720879 32728308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02472 K01937 - gmx:100819563 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02472 08 32720879 32728308 Gma08g02472 08 32720879 32728308 ECH