Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02153 ATGTCTGATGATAACACCAAAGCTTGGAATCAGATATTGTTGCTGACAATTGTGCTTGCAATTTGGTGGCTACTGTGTCATTTAGCAGAGGATAGAGAAACCAATCCCATTGTCAATGAGGTTGATGATGAGCTGGGGGAGATATTAGAGCACCCCAATGGTGAACTAGACCATTATTTTGATGAGGATGGTCATCACCGGGCCGCTGAGCCTGGTGGCGATGCCAATGGGAGACACGGTGGTTGCTCCATCTGTGGAAATTTTAGCACCACAAGGTGTGCTAGCTGCAAGGCTGCTAGATACTGCTCAGCGAAATGCCAAATTATTCATTGGAGGTCGGGGCATAAATATGAATGTTCTGAATCAGAGATTACAGCAGATGAAGCAAGACCAACTCATGATCATGGAACCTCCAAGCTTGTCGAGAAGTCTGAAATGGCCATTCTTTTACCAAAGACGAACCCCAACCTCACAAATGTGACCTATTCTGGCGATGAGGTCGTCGTCGATGACAGTGCCTTTGTTAGCCACCCTTCTCTAGGTGATAGATCCATCTTAGGAGAAAGGTGTAGGAACTTTAAGAAGAGGGTGATGGGGACAATTTGGAATCGGGATGCCACTTCGAAGACTGGTGTAAGCAATTTAAGAAGAAGGCGATGA 660 0.4591 MSDDNTKAWNQILLLTIVLAIWWLLCHLAEDRETNPIVNEVDDELGEILEHPNGELDHYFDEDGHHRAAEPGGDANGRHGGCSICGNFSTTRCASCKAARYCSAKCQIIHWRSGHKYECSESEITADEARPTHDHGTSKLVEKSEMAILLPKTNPNLTNVTYSGDEVVVDDSAFVSHPSLGDRSILGERCRNFKKRVMGTIWNRDATSKTGVSNLRRRR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02153 219 Pfam MYND finger 82 119 IPR002893 -
Gma08g02153 219 ProSiteProfiles Zinc finger MYND-type profile. 82 119 IPR002893 -
Gma08g02153 219 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 76 147 - -
Gma08g02153 219 SUPERFAMILY HIT/MYND zinc finger-like 79 120 - -
Gma08g02153 219 Gene3D - 70 124 - -
Gma08g02153 219 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17 76 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02153 Gma-Chr8 19975453 19979646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02153 82 125 Miscellaneous Gene Families AT4G31670 56.818 1.41e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02153 K11855 - pvu:PHAVU_011G179600g 183.726