Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02083 ATGATGAACGCCGCAACAGCAGCTAATAGCAGTGTTTATTCACAGACACAGTGCAGACTACTTTCCTCGGATCTTCGAAGTTCGATTCCTTTCTTGAATGAACGCAAGTCACGGTTGGTGGTAAGGGCTGGCGGTCGTCCTCCTCAAAATATGGGCAAGGACGAGGATGAGAAGCAGCAGCAGCGTGTCATACAACAACAACAACAACAAGAACAACAAGCACCTCCGCCCGTGTCTCTTAGCCTGGACGACGTGAACCCCGTAGGACTGGGTCGAAGATCGCGGCAGTTGTTCGATGAGGTTTGGAGAAAGTTCTCGGGATTGGGTCAGATTTCTAGGACAATACGGTCGGATGATCAGGAGGCTCTGGATGCCCTTCTGGTCCGAGAAGGTCCGATGTGCGAGTTCGCAATCCCTGGCGCTCAGAATACTACTGTACTCGTTGTTGGTGCCACCAGCCGCATCGGTCGCATCGTTGTGAGAAAGCTCATGCTCAGGGGCTACGCTGTCAAGGCTCTGGTAAGGAGGGCAGACCAGGAGGTGCTTGAGCTCCTTCCAAGGTCTGTAGAGATAGTCATTGGGGATGTTGGTGATCCCGCCACTGTCAAGGCTGCTGTTGAAGGTTGCAACAAAATTATATATTGTGCCACTGCTCGCTCTGCTATAACTGGGGATCTCTTCCGCGTTGATCATCGAGGCGTTTATAATCTTACTAAAGCATTTCAGGATCACAGTAACAAATTGGCACAATCGCGGGCTGGGAAAAGCAGCAAAAGTAAGCTCTCGATTGCCAAATTCAAATCTGCATCGTCACTCAATGGATGGGAAGTTCGTCAAGGAACTTACTTCCAAGATGTAGTTGCCACAAAATACGATGGTGGGATGGATGCTAAATTTGATTTCACTGAGACTGGAGATGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGAGGCTATGTGGAACTATCCAAAAAGCTTTCTCTGCCACTAGGTTATACTCTTGATAGGTACGAGGGTCTGGTTCTTTCTGTCGGTGGCAATGGAAGATCTTATGTATTAATTCTAGAAGCTGGTCCTTCGGCAGATCCAAGTCAGAGTAGATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTACCATTTTCATCATTCCGCCCAGTGAAACCAGATGATCCAGTGTTAGATCCTTTTCTTGTGCATACTTTGACCATACGCTTTGAGCCTAGAAGACAGAGGCCTGTTGAAGGAAATGCAACAATGAAACAGGATTTAAGAAGCTTTAAGCTTATATTGGAATATATTAAAGCCTTGCCTACTGGGCAAGAAACCGATTTTGTATTAGTTTCATGTTCTGGACTAGGAATTGAGCCTTCCAGGCGGGAGCAGGTTCTTAAAGCCAAGAGGGCTGGTGAAGATTCCTTAAGAAGATCTGGCCTTGGATACACAATAGTCCGTCCTGGTCCATTGCAGGAAGAACCTGGAGGGCAGCGTGCTCTAATATTTGATCAAGGAAACAGAATATCACAGGGCATCAGCTGTGCTGATGTAGCTGATATATGTGTGAAGGCACTACATGATACAACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTATATTGCTGAGGATGGAAGGGAGCTTTATGAGCTGGTTGCACACTTGCCCGACAAAGCAAATAACTACTTGACACCAGCACTCTCTGTCTTAGAGAAGAATACCTGA 1740 0.4632 MMNAATAANSSVYSQTQCRLLSSDLRSSIPFLNERKSRLVVRAGGRPPQNMGKDEDEKQQQRVIQQQQQQEQQAPPPVSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRSDDQEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYAVKALVRRADQEVLELLPRSVEIVIGDVGDPATVKAAVEGCNKIIYCATARSAITGDLFRVDHRGVYNLTKAFQDHSNKLAQSRAGKSSKSKLSIAKFKSASSLNGWEVRQGTYFQDVVATKYDGGMDAKFDFTETGDAVFSGYVFNRGGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLILEAGPSADPSQSRLYFARISTKVGFCRVRVPFSSFRPVKPDDPVLDPFLVHTLTIRFEPRRQRPVEGNATMKQDLRSFKLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGNRISQGISCADVADICVKALHDTTARNKSFDVCYEYIAEDGRELYELVAHLPDKANNYLTPALSVLEKNT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02083 579 Pfam Complex I intermediate-associated protein 30 (CIA30) 293 393 IPR013857 -
Gma08g02083 579 PANTHER EPIMERASE-RELATED 54 578 - -
Gma08g02083 579 MobiDBLite consensus disorder prediction 39 85 - -
Gma08g02083 579 MobiDBLite consensus disorder prediction 62 79 - -
Gma08g02083 579 Pfam NAD(P)H-binding 150 244 IPR016040 -
Gma08g02083 579 Pfam NAD(P)H-binding 466 531 IPR016040 -
Gma08g02083 579 PANTHER HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 54 578 - -
Gma08g02083 579 SUPERFAMILY Galactose-binding domain-like 263 402 IPR008979 -
Gma08g02083 579 Gene3D - 401 555 - -
Gma08g02083 579 Gene3D - 141 273 - -
Gma08g02083 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 143 558 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02083 Gma-Chr8 18715693 18728568 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02083 - - gmx:100779812 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02083 08 18715693 18728568 Gma08g02083 08 18715693 18728568 ECH
Gma07g00004 07 61221 66471 Gma08g02083 08 18715693 18728568 GST