Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02080 ATGGCGGCAACCCAACCACCGCAGGGTCCGGATCGTACCACCGAAGAGATACCGGCCGAACCAGATAACTTGAAGGAGCAGGGTACAACAACTATAGGTCATTCAAGGGAGACCACAAGTCAATCAGGATCTTTAGGTTCAGTTGGAGATTGTCCTCTGTATCCTCCTAATGTGTATGCTCCCCAAGCCCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAATGGTGAATGGGATGAATATTCTTCATATGTCAATTCTGAGGGTTTAGACATTGGATCTCCTGGTGTTTACAATGAAAATCCATCTCTTATTTTCCATTCTGGGTATGGCTTCAACCCACAAGTGCCTTATGGACCATATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGTGTAGACACACAGTTATACTCCCCTCAGCAATTTCCATACACTGGGCCACCTTATTATCATCAGCTGGTTCCTCCTAGCTTACCATATCTTAATTCCCCTACTCCAGTTTCACAGCCAGAACTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAACATGTTTTTTGGACCAAGAGCGGGCTATCCATCAGTGGGATCTTTTGGTAGAGGCAACTTTCCTGTAGCGCCTGGTTCCTTTGGCTTTCATGAATCCCAACAAGGATTTGAAGGATCAAGATCTGGTGGAATCTGGTCAGACTGCTCAAAACCATCAGAAAGACAGAGATCTTTGATGCCCCTATCGCCATCTGTTTCTCCACAGCCAATGGGCTCACTTGGGTCATTTGGGCCTAGTGTTGGAATGGCTTCTCATCAACAGCAATCATTGTATGGGTTTGGATCTGGTTCAAACTCCTATGGTAGAGGATACCTGCCTAACCAGGGTTCTAGCTTTGGAGGCACTTCCATTTCCAATCTTAATGATAGGAGTTTTGCTTCTCTTGAAAATAGCAGGCGGCAAGGGAGACCAACTGCTTCTCTTTGCAACTGTAATGGTACTCTTGATATCCTTAGTGAGCAGAACCGAGGACCAAGGGCCTCGAAGTTGAAAAATCAAATTTCAACTGAAAATAATTCTGTGGATAGTAGTAAAAATAGTGCATCTACTGCCAAGTTCCAAAATGAATCACTCAATCGGTCAGATTTTGCCACAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAATGGAAACAGAAAGTTAGATGATGCATATCGCCAAGCAATGGAGAAGCAAGATGCCTGTCCTATATTTCTCTTTTTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAGTGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGGCAGTTTCCCTTGAAGTGGCACATAATTAAAGATGTTCCAAATAGTCAGTTTCGTCACATTATTCTTGAAAATAATGATAACAAGCCTGTGACAAACAGTCGAGATACTCAGGAGGTGAAGTTGGGACAGGGGGTTGAAATGTTGACCATTTTTAAAAACTATGAAACTGATGTGTCCATCCTGGATGATTTTGATTTTTATGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAGCAAAGCAGCATGGTGGCTACTGGATTAGTTGGAGAAAATGAGCATAGAAGTTCTGCTAACACTACCGGTGATTTCATGAAGCAGATGTCGAAGAGCTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAAGGAAGTTGTTGCAGATAGAGATAGTTTAGTCTCTCATGGTCATGGCCCCATTGGTAATGTAGTTAAACCTGATGATGGTCAATCAGTGACTGCCTCTTCAACTCAAACCAGTTAG 1911 0.4333 MAATQPPQGPDRTTEEIPAEPDNLKEQGTTTIGHSRETTSQSGSLGSVGDCPLYPPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNSEGLDIGSPGVYNENPSLIFHSGYGFNPQVPYGPYSPVTTPLPSVGVDTQLYSPQQFPYTGPPYYHQLVPPSLPYLNSPTPVSQPELTNLVGIDQQVDNMFFGPRAGYPSVGSFGRGNFPVAPGSFGFHESQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPQPMGSLGSFGPSVGMASHQQQSLYGFGSGSNSYGRGYLPNQGSSFGGTSISNLNDRSFASLENSRRQGRPTASLCNCNGTLDILSEQNRGPRASKLKNQISTENNSVDSSKNSASTAKFQNESLNRSDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDDAYRQAMEKQDACPIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPLKWHIIKDVPNSQFRHIILENNDNKPVTNSRDTQEVKLGQGVEMLTIFKNYETDVSILDDFDFYEDRQKAMQERKARQQSSMVATGLVGENEHRSSANTTGDFMKQMSKSFALVVRLDENNKEVVADRDSLVSHGHGPIGNVVKPDDGQSVTASSTQTS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02080 636 MobiDBLite consensus disorder prediction 216 266 - -
Gma08g02080 636 ProSiteProfiles YTH domain profile. 388 525 IPR007275 GO:0003723
Gma08g02080 636 MobiDBLite consensus disorder prediction 338 367 - -
Gma08g02080 636 Gene3D ph1033 like domains 363 540 - -
Gma08g02080 636 MobiDBLite consensus disorder prediction 217 266 - -
Gma08g02080 636 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 13 623 - -
Gma08g02080 636 MobiDBLite consensus disorder prediction 607 636 - -
Gma08g02080 636 MobiDBLite consensus disorder prediction 1 48 - -
Gma08g02080 636 Pfam YT521-B-like domain 388 526 IPR007275 GO:0003723
Gma08g02080 636 MobiDBLite consensus disorder prediction 24 47 - -
Gma08g02080 636 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 13 623 IPR045168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02080 Gma-Chr8 18663821 18671438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02080 K20102 - gmx:100779278 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02080 08 18663821 18671438 Gma08g02080 08 18663821 18671438 ECH
Gma07g00007 07 98592 106461 Gma08g02080 08 18663821 18671438 GST