Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02079 ATGAATACGATAACGACGACGACGATGACGATGAGTGTATTAAACATCTATGGCTATGGCTATGGTGTTGTAGCTGTTGTTGTGTTCCTTATATTATTGCTTTGGCAGCGTCACAGATTTTTCTTCGCTTCATCTCCGTCGTCTCCATCCACTTCATTACTGCTCTTCGATTCTATCAATTCAAACTCAAACTCCAGAAGCAGAACCTCAAATTTTGTGACAGATGCAGATTTGAAATTTTTAATGGAGATTTTGGATGAGAAGCTCGGCAGTGATAAATGGGAGGATGTTCTAGATAAAAGAAACCATCATCTAAGCTACAGTGTGAAATGCTGCAGGCCTAAGAATGGTCCCCTGAAATATTTGAGCAAGACTGTGTTCAATGACATTTCATCAGAGATGCTAAGAAACTTCTACATGGACAATGATTACAGAAAGCAGTGGGATAAAACACTGGTTGAGCATAAACAACTGCAGGTAGACAAATCTGATGGTACTGAAGTTGGTCATACAATTAAAAAGTTCCCTCTTTTAAAGCCTAGAGAATATGTGCTAGCTTGGAAGTTGTGGGAGGGGAGTGATAAAACATTTTACTGTTTTATGAAGGAATGTGAGCATCCTTTGGCACCACGACAGAGAAAATATGTACGAGTTGAGTTTTTTAGATCTGGCTGGCAAATAAGAGAAGTACCTGGTAGCAATGCCTGTGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTAAATACGGAGATGGCTAAGCTGGCCTTTCGCAAGGGCATATGGAACTATGTATGTAAGATGGATAACGCGCTTAGAAGATACTCTGTTATAGGCTATCATTTATCAAGTTCAGTTACCACTTCAATCGATTTAATGCAGAAGGTACCTGCTTGCTTGGACACTATTTCGAGTAACATCTCTCCAGCAAATCCTACCGTCTTCCATGATCAAGTTACTGATGAATCTCAAATTAGGATGATCCAAAGAAGGCCATCAAGAAAGTTGATAGCCAATGTAAGCGTGGTGCTAGATCAAACCAAAGCAAACAAAGTTGAAGAATTAATTGGAAGGTTAAGGAGGCCGAAGGAGAATGATGGGTTTGCAAACCTCAGTGAAATCAACTGCTATAATACTTGTATTAGCATGTGTGTAATATTATAA 1164 0.3926 MNTITTTTMTMSVLNIYGYGYGVVAVVVFLILLLWQRHRFFFASSPSSPSTSLLLFDSINSNSNSRSRTSNFVTDADLKFLMEILDEKLGSDKWEDVLDKRNHHLSYSVKCCRPKNGPLKYLSKTVFNDISSEMLRNFYMDNDYRKQWDKTLVEHKQLQVDKSDGTEVGHTIKKFPLLKPREYVLAWKLWEGSDKTFYCFMKECEHPLAPRQRKYVRVEFFRSGWQIREVPGSNACEITMFHQEDAGLNTEMAKLAFRKGIWNYVCKMDNALRRYSVIGYHLSSSVTTSIDLMQKVPACLDTISSNISPANPTVFHDQVTDESQIRMIQRRPSRKLIANVSVVLDQTKANKVEELIGRLRRPKENDGFANLSEINCYNTCISMCVIL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02079 387 Gene3D - 67 277 IPR023393 -
Gma08g02079 387 CDD START_STARD2_7-like 73 275 - -
Gma08g02079 387 Pfam START domain 125 245 IPR002913 GO:0008289
Gma08g02079 387 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 20 341 - -
Gma08g02079 387 SUPERFAMILY Bet v1-like 82 275 - -
Gma08g02079 387 ProSiteProfiles START domain profile. 94 277 IPR002913 GO:0008289
Gma08g02079 387 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 20 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02079 Gma-Chr8 18645194 18659393 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02079 - - gmx:102661161 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02079 08 18645194 18659393 Gma08g02079 08 18645194 18659393 ECH