Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01987 ATGTCAGTGAAAAATTTTCCTGAAGAATGCTGGGAATTGGTGTTCAGATTCATTGGCCATGGTCGTCATTTGGAATCTCTATCTTTGGTTTGCAAGCAGTTCCTTTCCATCACAAACCGGCTTCAATTTTCTCTCACAATACATGATCCAACCATTCCAGTCCTTCCTAGGCTACTCCTGAGGTTTCCAAGGCTCAGAATCTTAGACCTCAGTCACTTGAATAGCCACCATGAAGGCTTGCTTCGTCAAATTTCACAATCCGGTTTGGAACTTGATTTGCTTAATCTGTCCAACCAGAGAACACTTCCTGTTGATGGCTTGCGAGAACTCGGCTCAAAGATGAAAAATTTGAGGGTGCTGATCTGCTCAAACATTGGTTCTCTTCGCGATAGCCATCTTGTAGTCATGGCTTATTGTTTCCCATTTCTCGAAGAGCTTGACATAAGCTTCCCATTGGATTCTCAAGCATCTGATTTTGGGGTGCTAAGGCTGTCTTCAATGCTTGAGAATCTTCGCAAGATTAATATCTCTGGTAATTACTTGATCACTGATAAATCCTTGTTCTCTCTATGCCAAAACTGTTTGTCATTGCAAGAGATTTCATTCTTCACCTGTTTTAAGATCACTCAATTAGGCATTGCCTCCGCGATCCGCCTCAGACCCGGTTTGAATTCCATTTCCTTTAACATTGAAAAGAAAAGAATACATGGACCTGGTTTAACACTCGCCCCCATTGACTTGGATTTGATTGATTCATTCAGCAGTTTGAAAAGGTTAACTGCTATTGATTTGTCAAATTCTGTTATCTCGGATGAGTTTCTCTTTGCAGTTGCAGAAGGTGGAGGTCTTCTGCTAAAGAAACTTATCCTCCAAAACTGCTGCAATTGCACATTTTCAGGAATCTCTTATGTGCTATCCAAATGTCAATCTGTTCAATGCTTGGATCTTCGGAAAGCTGATTTTTTAACTGATCAATGTATCCGCAAGTTATCTCTATTTCTTCTTAACTTAACTTCTATAAACCTTAGTGGTTGTTGCCAGCTGACCAATTCAACATTTTTCATACTCACAAGAAACTGTTCTTCGCTCAGTGAGATCAAAATGGAGAGAACATATCTTGGGGTGGAAGGGGAAGAAGAAGAAGAAGATTCAATGCCAGATTCTTTTGTCAACCTTGAAGTGAAAAAACTTTATTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTCTGATAAAATTTGTTTCCATTTGCCCCAGTTTGCAGCTTCTTGACTTAACCGGTTGCGAGGGTGTTTCTGGTGAATGTATTGGTGATGTTTTGAAGAGATGCTGTGAGATAAGGCATTTGAACCTGGCCTATACAGGAATGAAAGTGTTTGAGATGATGGACTTTGAAGTTTCCCAACTTGAGGTGTTGAACTTGTCAGGGTCAAGAATTGAGGATGAAGCACTTTCAATAATCTCAAAGAGGTGTAGTGGACTACTACTTCTGGATATCCAGAGTTGCTGGCATGTTACACCAAAGGGTGTAGGTGAAATAGTTGAAAAATGCAGGACGTTGAAAGAGTTGAATCTAAAGAATTGTAGGTTGGTGAGTGATGATTTTGTTGCTTGGGTGGAGATTTCAAGACCATCATTGAGAACAATAACAACACCTTCTGATGTTGGTGTTTATTGCTGA 1680 0.4012 MSVKNFPEECWELVFRFIGHGRHLESLSLVCKQFLSITNRLQFSLTIHDPTIPVLPRLLLRFPRLRILDLSHLNSHHEGLLRQISQSGLELDLLNLSNQRTLPVDGLRELGSKMKNLRVLICSNIGSLRDSHLVVMAYCFPFLEELDISFPLDSQASDFGVLRLSSMLENLRKINISGNYLITDKSLFSLCQNCLSLQEISFFTCFKITQLGIASAIRLRPGLNSISFNIEKKRIHGPGLTLAPIDLDLIDSFSSLKRLTAIDLSNSVISDEFLFAVAEGGGLLLKKLILQNCCNCTFSGISYVLSKCQSVQCLDLRKADFLTDQCIRKLSLFLLNLTSINLSGCCQLTNSTFFILTRNCSSLSEIKMERTYLGVEGEEEEEDSMPDSFVNLEVKKLYLGDNVLLSDASLIKFVSICPSLQLLDLTGCEGVSGECIGDVLKRCCEIRHLNLAYTGMKVFEMMDFEVSQLEVLNLSGSRIEDEALSIISKRCSGLLLLDIQSCWHVTPKGVGEIVEKCRTLKELNLKNCRLVSDDFVAWVEISRPSLRTITTPSDVGVYC 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01987 559 SUPERFAMILY RNI-like 50 295 - -
Gma08g01987 559 SUPERFAMILY RNI-like 248 539 - -
Gma08g01987 559 SMART LRR_CC_2 256 280 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 168 193 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 194 219 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 417 442 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 517 544 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 334 359 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 466 490 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 491 516 IPR006553 -
Gma08g01987 559 SMART LRR_CC_2 88 113 IPR006553 -
Gma08g01987 559 Pfam Leucine Rich repeat 516 533 IPR001611 GO:0005515
Gma08g01987 559 PANTHER UNCHARACTERIZED 246 543 - -
Gma08g01987 559 PANTHER UNCHARACTERIZED 5 319 - -
Gma08g01987 559 Gene3D Ribonuclease Inhibitor 387 457 IPR032675 -
Gma08g01987 559 Gene3D Ribonuclease Inhibitor 458 551 IPR032675 -
Gma08g01987 559 PANTHER NODULIN-LIKE PROTEIN 5 319 - -
Gma08g01987 559 PANTHER NODULIN-LIKE PROTEIN 246 543 - -
Gma08g01987 559 Gene3D Ribonuclease Inhibitor 1 235 IPR032675 -
Gma08g01987 559 Gene3D Ribonuclease Inhibitor 236 374 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01987 Gma-Chr8 17863509 17865311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01987 K10268 - gmx:100811565 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00244 07 2086190 2088046 Gma08g01987 08 17863509 17865311 GST