Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01972 ATGACGATTTTCGAGTGGTGGGGTTCCCGGTACGTTGCGGTGGTTTCCTTCAATGACGTTGTTGTGGTGTCGCAGTCGTTGGCTATCGGTGCCGGAGACGTCTCGAGGTCTGGAGTGGCAATGCGAAGGAGTGGCGACTCTGACATCGGGGTCCTTGTCGATGGTGGCTCCGGTGGCGCTGAGTTTCCATTGTTGAGTGCTGTCGGAGGAGGTGGGGTGTTGTTTGCAATTTCCAGgcttcgccggacgagtcctcgctctcgccttcgcccgtcgtcgatcatcgcttatgacggtgctttaggtaatttgaatttgatggattccaataattggagacccaatcaaggtactaaccccactatggatacaagtgattggagagctcaactaccaactgattcacgccaaagaattgtcaacaaaataatggatacattaaaaaaacatcttcctgcttctggtcctgatggattgcatgaacttcggaagattgctcaaaggtttgaagacaagatttatactgctgcaacaagccagcctgattacctacggaaaatatctttgaagatgcttacaatggagactaaatcccaaaacaccttggctaacaatatgccaccaaatcaagttggccctagcaataaacctcctgatcaagggcttgttttgcagtctcaagttcataatcttgggcaacagcattctattcctttgtctagtcagctccagccacatcagcagcttctatctcaaaatgttcaaaacaatgttgcatctcaacctaaccttccacctgtatctagtctagcccagactaccagccaaaatattgtccagaactccaacatgcagaatataactgggccaaattcagttgggagcactattagccaaaattccaacttacagaatatgtttcctggttctcagagacaaatgccaggaaggcagcagattgttcccccacagaattcaccgcaatatctttaccaacagcagcgtttgaagcagaagcagcttcaatctcagatgcagcaacaacaacaaaaccttctgcaaccaaatcagttgcaatcttctcagcaatccattatgcaaacttcatctgttatgcagccatccatgatgcaaacatcttctctatctagcattccacagaatcaacagtctactaatgttcaacagtcaatgcagtccatgccacagcagcactcacaagttatcaggcatcagcaacaacagacttctattgtacatcagcaacaaataccagtcactcaacagccaagcttacctgcacaacagcaacaacaacttatggggcatcagccaaatacaacaaacatgcaacatgcacagatgcttgggcaacagaacaatgttggtgatatacagcaacCACAGAGGATGCTCTCACAACAGAGTAATCTTACAAACCTGCAACAGAGACAACAGTTAATAAATCAGCAAAACAACCCAGCAAATATACATCAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAACATTTGCTTGGACATGAATCTGGCAATGCTGACATGCAAACAAGTCATCACTCTGCACACATGTTGCAACAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAGTACATCAAATTTGTTGTTACCTCATTCACAGCAGTCACAACCACTGGGTTCACAACAGCAATTAATGCCACAGATTCACACTCAGTCTGCACAGTTGCAACAGCAATTGGGTTTGCCGCAGCAGCTAAATCCCTCACAAAGAGATATGCAGCAAAGAATTCAAGCGTCAGGGTCCTTACTTCAACAACAAAATGTTCTTGATCAACAGAAGCAGTTGTATCAGACTCAAAGAACTCTTCCAGAAACATCAGCAACTTCTCTGGATTCTACAACACAGACTGCACAACTAAGTGGGGCTGATTGGCAAGAAGAAGTATACCAGAAGCTCCAAACCATGAAAGAAAGTTACTTACCAGAGATGAATGAAATGTATCAAAAAATTGCTAATAAACTTCATCAGCATGATTCTCTTCCCCAACAACCAAAGTTAGATCAGATTGATAAGCTGAGGGCATATAAATCGATGTTGGAGCGTATGATGGCACTCCTACAGATTCCCAAGAACAACATTTTGCCTAATTTCAAGGAAAAACTGGGATCATACGAGAAGCAGATTATAAATCTTCTCATAAATTCAAATAGACCCAGGAAAGGCATGAATTCAGTACAGGCAGGACATCATCCCCCAACTCACATGTCTTCCATGCAACAGCCACAATCCCAAGTTACTCAAGTACATTCTCATGAAAATCAAATGAACTCTCAGTTGCAGTCAACAAATTTACAGGGTTCTGTACCAACCATGCAGCAGAATAATATTGCAAGCATGCAGCACAATTCTTTGTCTGGTGTATCAACAGGACAACAGAATATGATGAATTCAATGCAACCTGGAACTAATTTAGATTCTGTTCATGGAAATTCTGTGAACTCCCTTCAACAGATTCCAATGAACTCCCTCCAACAAAACCCTGTTAGTACAGCTCAACAGACTAACATTAATTCCTTACCATCGCAAGGTGGGGCAAATGTGATTCAACCAAATGCCCTTCAGTcaggttccagcgcacttcaacaccaactgaaacatcagcaggaacagcagatgctgcagagtcaacaactcaaacaacaatatcagcgacaacaactgatgcagaggcagctcctgcagcagcagcagcaactacaccatccaggaaagccacagcTATCTTCGCAATTGCAGACACATCAAATGCCTCAACTTCACCAAATGAATGATATAAATGATATAAAAATGCGACAAGGAATGGGTGTTAAGTCAGGTGTCTTTCAGCAGCATCTTACATCAGGTCAACACTCAACATATTCCCATCAGCAGCTGAAACAAGGGAGTGCATTTCCTGTTTCTTCACCCCAACTCCTTCAGGCTGCCTCTCCTCAGATTCAGCAACACTCATCTCCCCAGGTTGACCAACAAAATCATCTCCCATCTAAAACAAAAGTCACAACTCCTCTGCAATCTTCTAATTCACCCTTTGTGGGACCTACCCCTTCACCTCCCCTGGCTCCATCTCCTATGCCAGGAGAGTCTGAGAAGTCTATTCCTTGTGTTTCATCAATATCAAATGCTGCAAATATTGGACTTCAACAAACAGGGGGTGCAGTAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTTGTCCTGATGGTGCGCATGGTAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGCGGTGAAATCAATTTCGCGTAAAGCATTAAGTGCTGCGGTCATGGATATTGGTTCAGTTGTCAGCATGAATGATAGAATAGCAGGATCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGTCTACAGGCTAGAAATTTCATTGCACAAGATGGTTCCAATGGAATTAAGAGGATGAAACGTTACACCAGTGCTATTCCCTTGAATGTTGTGTCATCTCCTGGTAGCATGAATGATAGTATCAAGCAGTTAACTGCTTCAGAGACTTCTGATCTGGAGTCAACTGCAACATCCAGTGTCAAGAAACCAAAGATTGAGGTTAATCATGCCCTTTTGGAAGAAATAAGGGAGATTAATCACCGACTTATTGACACAGTAGTAGACATAAGCAATGAAGATGTTGATCCAACAGCTGCTGTTGCTGCTGCTGAAGGGGCAGAAGGGATTATTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCATCGCAGATGTCACCTATTCAGCCCCTGCATTTGCTGGTTCCTGCAAATTATCCTAATTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAAGGAGAATGAAGATCTTTCAGTGAAAGCAAGGTCAAAGTTTAGCACATCTTTACGCAGTTTATCACAACCTATGTCACTTGGGGAGATAGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCACAGCAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGTTTGACCACCAACTAA 4233 0.2991 MTIFEWWGSRYVAVVSFNDVVVVSQSLAIGAGDVSRSGVAMRRSGDSDIGVLVDGGSGGAEFPLLSAVGGGGVLFAISRLRRTSPRSRLRPSSIIAYDGALGNLNLMDSNNWRPNQGTNPTMDTSDWRAQLPTDSRQRIVNKIMDTLKKHLPASGPDGLHELRKIAQRFEDKIYTAATSQPDYLRKISLKMLTMETKSQNTLANNMPPNQVGPSNKPPDQGLVLQSQVHNLGQQHSIPLSSQLQPHQQLLSQNVQNNVASQPNLPPVSSLAQTTSQNIVQNSNMQNITGPNSVGSTISQNSNLQNMFPGSQRQMPGRQQIVPPQNSPQYLYQQQRLKQKQLQSQMQQQQQNLLQPNQLQSSQQSIMQTSSVMQPSMMQTSSLSSIPQNQQSTNVQQSMQSMPQQHSQVIRHQQQQTSIVHQQQIPVTQQPSLPAQQQQQLMGHQPNTTNMQHAQMLGQQNNVGDIQQPQRMLSQQSNLTNLQQRQQLINQQNNPANIHQQLGNNGPGLQQQHLLGHESGNADMQTSHHSAHMLQQPKVPMQQQSQQSTSNLLLPHSQQSQPLGSQQQLMPQIHTQSAQLQQQLGLPQQLNPSQRDMQQRIQASGSLLQQQNVLDQQKQLYQTQRTLPETSATSLDSTTQTAQLSGADWQEEVYQKLQTMKESYLPEMNEMYQKIANKLHQHDSLPQQPKLDQIDKLRAYKSMLERMMALLQIPKNNILPNFKEKLGSYEKQIINLLINSNRPRKGMNSVQAGHHPPTHMSSMQQPQSQVTQVHSHENQMNSQLQSTNLQGSVPTMQQNNIASMQHNSLSGVSTGQQNMMNSMQPGTNLDSVHGNSVNSLQQIPMNSLQQNPVSTAQQTNINSLPSQGGANVIQPNALQSGSSALQHQLKHQQEQQMLQSQQLKQQYQRQQLMQRQLLQQQQQLHHPGKPQLSSQLQTHQMPQLHQMNDINDIKMRQGMGVKSGVFQQHLTSGQHSTYSHQQLKQGSAFPVSSPQLLQAASPQIQQHSSPQVDQQNHLPSKTKVTTPLQSSNSPFVGPTPSPPLAPSPMPGESEKSIPCVSSISNAANIGLQQTGGAVAPAQSLAIGTPGISASPLLAEFSCPDGAHGNALAATSGKSTVTEQPLERLINAVKSISRKALSAAVMDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFIAQDGSNGIKRMKRYTSAIPLNVVSSPGSMNDSIKQLTASETSDLESTATSSVKKPKIEVNHALLEEIREINHRLIDTVVDISNEDVDPTAAVAAAEGAEGIIVKCSFIAVALSPSLKSQYASSQMSPIQPLHLLVPANYPNCSPILLDKFPVESSKENEDLSVKARSKFSTSLRSLSQPMSLGEIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01972 1410 MobiDBLite consensus disorder prediction 201 222 - -
Gma08g01972 1410 Coils Coil 331 351 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 341 421 - -
Gma08g01972 1410 SUPERFAMILY Kix domain of CBP (creb binding protein) 124 198 IPR036529 GO:0003712|GO:0006355
Gma08g01972 1410 MobiDBLite consensus disorder prediction 849 873 - -
Gma08g01972 1410 Pfam KIX domain 125 204 IPR036546 -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 283 324 - -
Gma08g01972 1410 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 107 1409 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 997 1054 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 997 1034 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 753 783 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 917 939 - -
Gma08g01972 1410 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 107 1409 IPR044661 GO:0003713|GO:0031490
Gma08g01972 1410 Gene3D Coactivator CBP, KIX domain 126 204 IPR036529 GO:0003712|GO:0006355
Gma08g01972 1410 Coils Coil 889 919 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 742 783 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 519 582 - -
Gma08g01972 1410 MobiDBLite consensus disorder prediction 807 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01972 Gma-Chr8 17708040 17727087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01972 K14972 - gmx:100805336 2191.39