Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01971 ATGGATTGGTTCTCCTGGCTTTCCAAAACAGGCCTTGAGCCAACCCTAGTGTATGAGTATGGCCTTACTTTTGCTCACAACGAGCTTGAAGAAGAAGACATAACATACTTCAACCATGAGTTTCTCATGAGCATGGGAATCTCCATAGCCAAACACAGGCTAGAGATTCTCAAGCTTGCAAGGAAAGTGAAGGGAAAGAGGGCGGCACCACCACGCCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGCTTAGCCAATTACATTCGCTCGTTCATCAGCACTTGTGAAGAAGAGTCATCAGCACTTGTGGTGGTGCCATCATCATCATCAAGGTCTTATTATGGGACAAGATGGAAGAGTAATCATGTGATGAAGAGGAACAAAAAGATGGTGGTGGCTAAGCAAGAGAGGCTCTTGCTCACAAATGGAAGCCCTAATACTGTTGTGCATGGTCTTGATGCTTTCACTAGTCCTAATATTGTTTATCATTTCCAAAAGGATGAACAAATGGAAGGAGATGATGGATATTGGTCTTCAGCTGCTACTGAACAAATCAGAAGAAGGGGGGAAAAAGATGGAGGTGCATGTCCCACACCCTACGCATGTAACAAGATGATCTTCATTTCTTACTCAAAGTGGTGA 654 0.448 MDWFSWLSKTGLEPTLVYEYGLTFAHNELEEEDITYFNHEFLMSMGISIAKHRLEILKLARKVKGKRAAPPRPVARLMVAIKRTKRCLANYIRSFISTCEEESSALVVVPSSSSRSYYGTRWKSNHVMKRNKKMVVAKQERLLLTNGSPNTVVHGLDAFTSPNIVYHFQKDEQMEGDDGYWSSAATEQIRRRGEKDGGACPTPYACNKMIFISYSKW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01971 217 ProSiteProfiles SAM domain profile. 1 66 IPR001660 GO:0005515
Gma08g01971 217 CDD SAM_superfamily 2 62 - -
Gma08g01971 217 SUPERFAMILY SAM/Pointed domain 5 66 IPR013761 -
Gma08g01971 217 PANTHER OSJNBA0033G05.11 PROTEIN 1 191 - -
Gma08g01971 217 PANTHER OSJNBA0033G05.11 PROTEIN 1 191 - -
Gma08g01971 217 Gene3D - 1 69 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01971 Gma-Chr8 17705096 17706517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01971 - - gmx:100500342 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01971 08 17705096 17706517 Gma08g01971 08 17705096 17706517 ECH
Gma07g00261 07 2265744 2266956 Gma08g01971 08 17705096 17706517 GST