Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01961 ATGGTTTTTTCTGCTGTGTTCACTCCCGCTCTCAACCTTGCCATTTCATCCACCACATACTGTTGTAGAAGAAGAAGAACATCATCAACCACAAGAAGAGTTGTTACAGTGAAAGCTAACTCAACAAAGAAAGATGAATCCAAGGACAAAGATGCTCCAGCGTTCAACCCTTTTGGATTTGTCACTGACAACCCTTCTAGCCGCAGTGCTATTCAACTGCCTGAAAACCCTGCTGAAGATGGCAACGTTGGACAAATGCTATATAGGATAGAAGACAAGGGCAAGGAATATGGGTCATATGTTAAATCTGGCAAGCTAAGATGGTTTGTAAGAGAAACTGGATCAGCAAATGGCAGAAGAGGAACAATTATCTTCCTTCATGGGGCCCCTACACAATCTTTTAGCTACCGAGTTGTCATGTCTCAGTTGTCGGATGCAGGGTTCCACTGCTTTGCACCTGACTGGATAGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGATGCATTGGATAAGCTGCTTGAGGTGCTGGGGGTCAAATCTCCCTTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGTTCATATGGATTAACTTGGGCACTGAAGAACTCGAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCCTTAACAGATTCGTCTCCCATTCCTGGACTTTTTCAGAAGCTAAGAATTCCTCTATATGGTGAATTTACCAGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGGAGGTAGCCCTTACGTTCTGAAAAATGAAAAGGCTGACGTGTACCGGCTACCTTATTTGGCAAGCAGTGGACCTGGATTTGCTCTACTTGAAGCTGCAAGAAAAGCTAACTTCAAAGGTACTTTCAGTGAAATAGCAGCAGGATTTGCAACTGACAGATGGGATAAACCAATACTACTTGCTTGGGGATTATCAGACAAGTACTTGCCCCAGTCTGTAGCAGAGCAGTTTCAGAAAGGAAATCCAGCACAAATCCAGCTTAAATTGATTGAAGGAGCTGGTCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGATACTTTCAGAGTGTTCTTCTTCTGA 1131 0.4297 MVFSAVFTPALNLAISSTTYCCRRRRTSSTTRRVVTVKANSTKKDESKDKDAPAFNPFGFVTDNPSSRSAIQLPENPAEDGNVGQMLYRIEDKGKEYGSYVKSGKLRWFVRETGSANGRRGTIIFLHGAPTQSFSYRVVMSQLSDAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTDSSPIPGLFQKLRIPLYGEFTSQNAIIAERFIEGGSPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFSEIAAGFATDRWDKPILLAWGLSDKYLPQSVAEQFQKGNPAQIQLKLIEGAGHMPQEDWPEKVVDTFRVFFF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01961 376 Pfam Alpha/beta hydrolase family 123 369 IPR000073 -
Gma08g01961 376 Gene3D alpha/beta hydrolase 94 375 IPR029058 -
Gma08g01961 376 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 96 375 - -
Gma08g01961 376 SUPERFAMILY alpha/beta-Hydrolases 99 374 IPR029058 -
Gma08g01961 376 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 96 375 - -
Gma08g01961 376 PRINTS Alpha/beta hydrolase fold signature 147 162 IPR000073 -
Gma08g01961 376 PRINTS Alpha/beta hydrolase fold signature 211 224 IPR000073 -
Gma08g01961 376 PRINTS Alpha/beta hydrolase fold signature 320 334 IPR000073 -
Gma08g01961 376 PRINTS Epoxide hydrolase signature 127 145 IPR000639 GO:0003824
Gma08g01961 376 PRINTS Epoxide hydrolase signature 147 162 IPR000639 GO:0003824
Gma08g01961 376 PRINTS Epoxide hydrolase signature 352 374 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01961 Gma-Chr8 17561567 17571065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01961 60 172 Acyl Lipid Metabolism Gene Families AT4G15960 26.316 5.20e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01961 - - gmx:100793646 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01961 08 17561567 17571065 Gma08g01961 08 17561567 17571065 ECH
Gma07g00269 07 2369924 2374253 Gma08g01961 08 17561567 17571065 GST