Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01955 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGATTCCCTCCTCCCTCTCCCGTCGACCAACTTCGCCCTCTCTTTCCCCACATGGACGACTTGGTTCTTGAGAGAGCTCTCCAAGAATGTGGCAATGATATAGATGCTGCCATCAAGAGGCTTAATGAGCTTTGCTTGGGAACTGCCGATAGAAATGGGATTGCTGAAGAATTGGAGGTTGTCATTAATCTGGATGCAGGTAATTTGGAAGGTGATGGAAATGCTTCTGTTTCTGAGGAGCAGCCTGCTTTGAACAACCACCTTCCGGCAGATGGAGCAGAATGGATTGATTTTTTTGTCAGGGAAATGATGGTTGCTACTAGTGTTGAAGATGCTAGAGCACGTGCTGCCAGAATGCTGGAGGTTCTAGAGAAATCAATCAGTGAAAGAGCAAAGGCTGAGGCAACTGATGTGCTTCAGAAGGAAAATTTGATGCTGAAAGAGCAAATTGAAGCGTTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATCTGCTGATTATGAGGTTAAGAACCAAGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAAAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTCCTGGGCGCTTCCCACCTGATGTCTTCTAA 783 0.4572 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPPSPVDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGTADRNGIAEELEVVINLDAGNLEGDGNASVSEEQPALNNHLPADGAEWIDFFVREMMVATSVEDARARAARMLEVLEKSISERAKAEATDVLQKENLMLKEQIEALIKEKNSFKNAFRIQHERSADYEVKNQELQHLKQLVSQYQEQIKTLEVNNYALAMHLKQAQQSNPFPGRFPPDVF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01955 260 Coils Coil 169 196 - -
Gma08g01955 260 Pfam CUE domain 41 76 IPR003892 GO:0043130
Gma08g01955 260 Gene3D - 38 79 - -
Gma08g01955 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Gma08g01955 260 Coils Coil 207 234 - -
Gma08g01955 260 ProSiteProfiles CUE domain profile. 36 81 IPR003892 GO:0043130
Gma08g01955 260 CDD CUE 39 74 - -
Gma08g01955 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Gma08g01955 260 SUPERFAMILY UBA-like 39 81 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01955 Gma-Chr8 17527036 17530448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01955 - - gmx:100791728 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01955 08 17527036 17530448 Gma08g01955 08 17527036 17530448 ECH
Gma07g00275 07 2398993 2403226 Gma08g01955 08 17527036 17530448 GST
Gma13g03281 13 46774717 46777890 Gma08g01955 08 17527036 17530448 PCT
Gma15g00070 15 588379 591074 Gma08g01955 08 17527036 17530448 PCT
Gma08g01955 08 17527036 17530448 Gma13g03281 13 46774717 46777890 PCT
Gma08g01955 08 17527036 17530448 Gma15g00070 15 588379 591074 PCT