Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01950 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTCCTCGCCTTTCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTCTCCGAGGTTGTCAACATTTATTTCCACGAATCCGAAAAGCTTCTCAGAAATCTCAGAGCTTTGCTGATGGAGAAGGAGTTTTCGGACTATAAGAAAATGGGGATCCATTTGAATCAGTTCATGGGTAGCAGTTCCAGTATTGGCGCCAAGAGAGTTAGAAATGTTTGCGTTGCCTTTCGTGCCGCTACTGAACAGAATAACCGTGCTGGTTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCACGAATTGTTCCAAATTGAACAGCAACGTGCTTTGGCCGCAGGAGTAAGGTACCCGGTGCAGAATTAA 471 0.4798 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRALLMEKEFSDYKKMGIHLNQFMGSSSSIGAKRVRNVCVAFRAATEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01950 156 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Gma08g01950 156 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Gma08g01950 156 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Gma08g01950 156 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Gma08g01950 156 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Gma08g01950 156 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01950 Gma-Chr8 17475748 17478037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01950 K14490 - gmx:100789608 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01950 08 17475748 17478037 Gma08g01950 08 17475748 17478037 ECH
Gma07g00280 07 2442695 2444502 Gma08g01950 08 17475748 17478037 GST
Gma15g00074 15 625087 626516 Gma08g01950 08 17475748 17478037 PCT
Gma08g01950 08 17475748 17478037 Gma15g00074 15 625087 626516 PCT