Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01947 ATGAACAAGATGACTGGTCTTGCTCTTGGTGGAGTGGTGGCGGCTATTTTAATGGTTCTACAGTACGCAGAGGCACAGACAAGTTACGTTGTTGGAGATGGCACGGGTTGGAGAGTTCCACAAGATGCTTCCACATACCAAAATTGGGCTTCTGACAAGAATTTCACAGTTGGAGATACTCTATCATTCATTTTCCAGACAGGGTTGCATAACGTAATTGAAGTGTCGGAAGAGTCATACAATTCGTGCAGTTCAGCGAATCCTATAGGTACAACCTACAACACGGGCCCTGCCAACGTTACACTGAACAGAGGTGGTGAACATTACTACATTTGTAGCTTTGGTAATCACTGCAACAATGGGCAGAGGTTAGCCATCACTGTCTCTGGCTCTTCCACCGCCTTTCCACCAGCCACCACCACCGCTCCGCCACCACCTTCGTCTTCCGCGCCCTCTTCTTTCCATACTACTGTCCTTCCCTTCCTCTTCCTCTCCGCATTTGTCTTTATAGCGTTTTAG 519 0.4798 MNKMTGLALGGVVAAILMVLQYAEAQTSYVVGDGTGWRVPQDASTYQNWASDKNFTVGDTLSFIFQTGLHNVIEVSEESYNSCSSANPIGTTYNTGPANVTLNRGGEHYYICSFGNHCNNGQRLAITVSGSSTAFPPATTTAPPPPSSSAPSSFHTTVLPFLFLSAFVFIAF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01947 172 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Gma08g01947 172 PANTHER BLUE COPPER PROTEIN 13 162 IPR039391 GO:0009055
Gma08g01947 172 Gene3D - 27 139 IPR008972 -
Gma08g01947 172 ProSitePatterns Type-1 copper (blue) proteins signature. 106 122 IPR028871 -
Gma08g01947 172 PANTHER UMECYANIN-LIKE 13 162 - -
Gma08g01947 172 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Gma08g01947 172 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01947 Gma-Chr8 17444035 17444771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01947 28 148 Miscellaneous Gene Families AT5G20230 39.837 2.40e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01947 - - gmx:100305545 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01947 08 17444035 17444771 Gma08g01947 08 17444035 17444771 ECH