Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01942 ATGGCTTTGGCACGTTTGGCTTTGAAAAACTTGCAACAAAGGGTGTGTGCTTCCTCTTTCTTGAGTGGCAATGTTCACAAGCAGAGGTGGAACAATGAGTTGCTGAGAAGGTTTGGTACTGCAGCTGGGGACAAGGGAAAATCTGAAGGCACTGAAGTTGCTGTCACTGAAGGGAAAAAGTCTAATAGGATGTTCCCAAGGAGGAGGGGCAGAAGATGGGCTTGGAGAAATGAGGATCATGATGACTTCCCTCCTGCTCTTTATGAGTTGTTTCCTTCAGGGCTTGGGAGTGCACTGATGCAGGCAAGTAATAACATCAACAGGCTGTTTGAGAACATGAATCTGACACCTTGGTCTCTGACTAGTGGGCGTGTGAAAGAGAAGGATGACCATTACAAACTACGGTACGAGATGCCGGGGATCGCCAAAGAGGACGTGAAGATCACCATTGATGATGATGGGGTGTTGACAATAAAGGGAGAGCACAAGGAAGAGAAAGATGATGATGAGCAATATTGGTCATCAAGTAGCTATGGATACTATAACACAAGCCTGATTTTGCCTGATGATGCTAAAGCTGATGACATTAAGGCAGAGTTGAAGGATGGTGTCCTAACTCTAATCATTCCTAAGACTCAGAACCCCCAAAAGGATGTGAAACAAGTCACAATAGAATGA 678 0.4513 MALARLALKNLQQRVCASSFLSGNVHKQRWNNELLRRFGTAAGDKGKSEGTEVAVTEGKKSNRMFPRRRGRRWAWRNEDHDDFPPALYELFPSGLGSALMQASNNINRLFENMNLTPWSLTSGRVKEKDDHYKLRYEMPGIAKEDVKITIDDDGVLTIKGEHKEEKDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDGVLTLIIPKTQNPQKDVKQVTIE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01942 225 Pfam Hsp20/alpha crystallin family 125 224 IPR002068 -
Gma08g01942 225 Gene3D - 95 225 IPR008978 -
Gma08g01942 225 SUPERFAMILY HSP20-like chaperones 115 224 IPR008978 -
Gma08g01942 225 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 5 225 - -
Gma08g01942 225 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 114 225 IPR002068 -
Gma08g01942 225 Coils Coil 224 225 - -
Gma08g01942 225 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 5 225 - -
Gma08g01942 225 CDD ACD_sHsps-like 125 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01942 Gma-Chr8 17423102 17424817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01942 K13993 - gmx:100787482 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01942 08 17423102 17424817 Gma08g01942 08 17423102 17424817 ECH
Gma07g00287 07 2486411 2487517 Gma08g01942 08 17423102 17424817 GST