Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01922 ATGAGCTATCCACATTATCATATGGGCTCTGGTAGTAGAACTGCTAGGAGAAGCTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCTACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGctcttatcagctgctggaatctcttccacttccaaatataaaatggatttgcccaactgctcctacccgtcctgtaaccatacttggtggtttttcttgcactgcatggtttgatatgggagaactttcagaagatggtccagatgattgggagggtttagatgcctcagcatcacatattgccaacttgttgtcaacagagccAGCTGATGTGAAAGTAggaattggaggcttcagtatgggtgctgcagtagctcaatactctgcaacttgttttgccatgggaaggtatggaaatggcatcccttaccctgtcaacctaagagcagttgtTGGACTCAGTGGCTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAAATTGAAGTGTCACATGAAGCAAGAAGGCGAGCTGCTTCGTTACCTGTTTTGCTGAGCCATGGAATCAGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGGTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCATTATACCGTTCCTAGGGAGATGGATGAGGTCTCTAATTGGCTTAGCTCAAGGCTGGGGCTTGGGGGATCCACATGA 771 0.2685 MSYPHYHMGSGSRTARRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDWEGLDASASHIANLLSTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSHEARRRAASLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLSSRLGLGGST 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01922 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Gma08g01922 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Gma08g01922 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Gma08g01922 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Gma08g01922 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01922 Gma-Chr8 17294875 17298169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01922 6 255 Acyl Lipid Metabolism Gene Families AT3G15650 75.600 5.50e-129 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01922 K06130 - gmx:100782153 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00305 07 2604889 2607684 Gma08g01922 08 17294875 17298169 ECH
Gma15g00108 15 831700 835287 Gma08g01922 08 17294875 17298169 ECH
Gma06g01951 06 22754458 22766828 Gma08g01922 08 17294875 17298169 ECH
Gma08g01922 08 17294875 17298169 Gma08g01922 08 17294875 17298169 ECH
Gma07g00305 07 2604889 2607684 Gma08g01922 08 17294875 17298169 GST
Gma13g03248 13 46561295 46565114 Gma08g01922 08 17294875 17298169 PCT
Gma15g00108 15 831700 835287 Gma08g01922 08 17294875 17298169 PCT
Gma08g01922 08 17294875 17298169 Gma13g03248 13 46561295 46565114 PCT
Gma08g01922 08 17294875 17298169 Gma15g00108 15 831700 835287 PCT