Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01920 ATGTTAAGGAAAGGCGCGAATCCCATGATTTTGTTCAAACCTTCATCAGCTATGCGATTGTCTCCTTGTGCGAACACCACTTCAATGAGTTCCGGATCGGGTTCACTTTTGTGGTTCCGGAAGGGTCTTCGGATCCATGACAACCCCGCTCTCGAAGTCGCTTCGCGTGGAGCCTCTCATCTCTACCCTGTCTTTGTCATCGACCCGCATTTCATGGAACCCGACCCGAATTCTTCCGCACCCGGATCCTCTCGCGCGGGTCTGAACCGCATCAAGTTCTTGCTGGAGTGCCTCGTTGACCTTGACCTCAACCTCAAGAACCTTGGCTCAAGACTTTTGATTCTCAAGGGTGACCCTGCTGAAGTTGTCATTCGATGCTTGAAGGAGTTGCATGTTAAAAAGCTATGCTTTGAGTACGACACTGAACCGTATTATCAGGCTCTGGATGTTAAAGTTAAGAACTTTGCACTTGCTGCTGGAATTGAGGTTTTCTCTCCTGTAAGTCATACACTCTTCAATCCCACGGATATCATAGAGAAGAATGGAGGGAAGCCGCCGCTTAGTTATCAATCGTTTGTCAAGCTTGCTGGGGAACCACCATCTTCTCTCTCTACTGTGTACTCTTCACTTCCTCCAGTTGGCAATCTTGGAAGTTGTGATATTTCTGAAGTTCCAACAATCAGAGATCTTGGATATGGAGATGCTGAACAGGATGAGTTCTCTCCTTTCAAAGGTGGTGAGTCTGAAGCATTGAAGAGGTTAGATGAATGCATGAAAGACAAGAAGTGGGTGGCAAACTTTGAGAAACCCAAGGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTATCTGAAATTTGGTTGTCTCTCCCCCAGATATTTCTACCAGAGTATTCAAGATGTATATAAAAGTATGCCGAAGCATACATTACCTCCCGTTTCTCTTATAGGACAGTTGTTGTGGCGAGAATTCTTTTACACGGCTGCTTTTGGGACTCCAAATTTTGATAGGATGAAAGGCAATAGGATATGCAAGCAGATTCCTTGGAAGGATGATGATAAACTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTTCAGCTACGCAAATGGGGTTGGATGCATCATCTGGCACGGCATTCTGTTGCATGTTTTCTAACTCGAGGCGATCTGTTTGTTCATTGGGAAAAAGGACGAGATGTCTTCGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTTTCTTGTTCATCTTTCTTTTATCAGTATAATCGTATTTATTCTCCAACTACATTTGGTAAGAAGTATGACCCTAATGGCGACTATATTAGGCATTTTCTCCCAGTCTTAAAAGATATGCCCAGGGAGTACATTTATGAACCCTGGACGGCTCCTAAAAGCATTCAGACCAAAGCAAATTGCATAATTGGCAAAGACTACCCAATGCCAGTGGTTTCTCATGATTCTGCGAGTAAAGAGTGCAGAAGGAAAATGGGCGAGGCATATGCATTGAATAAAGAATTAAATGGTTTGGTTAGTGAAGATGATCTGAAAAATTTGAGGAGGAAATTAGATGAGAGTGAAGGGCAAGAGGCTGGAGCTAAAAGATATAAGCAACAGCTGATTGGCTGA 1692 0.4391 MLRKGANPMILFKPSSAMRLSPCANTTSMSSGSGSLLWFRKGLRIHDNPALEVASRGASHLYPVFVIDPHFMEPDPNSSAPGSSRAGLNRIKFLLECLVDLDLNLKNLGSRLLILKGDPAEVVIRCLKELHVKKLCFEYDTEPYYQALDVKVKNFALAAGIEVFSPVSHTLFNPTDIIEKNGGKPPLSYQSFVKLAGEPPSSLSTVYSSLPPVGNLGSCDISEVPTIRDLGYGDAEQDEFSPFKGGESEALKRLDECMKDKKWVANFEKPKGNPSAFLKPATTVLSPYLKFGCLSPRYFYQSIQDVYKSMPKHTLPPVSLIGQLLWREFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRKWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIRHFLPVLKDMPREYIYEPWTAPKSIQTKANCIIGKDYPMPVVSHDSASKECRRKMGEAYALNKELNGLVSEDDLKNLRRKLDESEGQEAGAKRYKQQLIG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01920 563 Pfam DNA photolyase 35 195 IPR006050 -
Gma08g01920 563 Gene3D HUPs 31 168 IPR014729 -
Gma08g01920 563 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 33 171 IPR006050 -
Gma08g01920 563 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 34 217 IPR036155 -
Gma08g01920 563 Pfam FAD binding domain of DNA photolyase 321 518 IPR005101 -
Gma08g01920 563 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 35 529 - -
Gma08g01920 563 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 235 524 IPR036134 -
Gma08g01920 563 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 338 562 - -
Gma08g01920 563 MobiDBLite consensus disorder prediction 544 563 - -
Gma08g01920 563 PANTHER CRYPTOCHROME 35 529 IPR002081 -
Gma08g01920 563 Gene3D - 169 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01920 Gma-Chr8 17277153 17281592 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01920 K02295 - gmx:100780347 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01920 08 17277153 17281592 Gma08g01920 08 17277153 17281592 ECH