Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01909 ATGGGTTCTCAAACAGCCTGCCAGGTTCCTATTGTGGACTTCACTGACGAGGAGTTGAAACCTGGTACAGCAAAGTGGGCTTCAGCATGCCTAGTGATTCGGAGTGCACTTGAGGATCATGGTTGTTTTTATGCTTTGTGTGATAAAGTTCCTATGGACCTTTACAACTCAGTTTTTGCTCTAATGGAAGAACTATTTTATCTTCCATTGGAAACAAAATTGCAAAAGATGAGTGATAAGCCCTACCATGGCTATTATGGACAATTTACTCATCTCCCTCTATATGAATCCCTAGGGATCAATGATCCATTGACCATGGAAGGAGTTCAAAACTTCACCAAACTAATGTGGCCAGCAGGATATGATCATTTCTGTGAGACTCTCAGTCTCTATGCAAAGCTGTTGGTAGAATTGGACCATATGGCTAAAAGAATGGTTTTTGATGGCTATGGTTTGGACCAAAGGCACTGTGATTCCCTTCTCGAATCAACCAATTACATGCTCCGGAGCTTCAAATATAGACTACCGCAGAAGGATGAAAACAATTTGGGATTGCATGCTCACACTGACACCTCCTTCTTTACCATTCTGCATCAGAATAATGTAAATGGTTTGCAAGTAAAATTGAAAAATGGAGAGTGGGTTGATATTGATCTCTCACCCTTCATGCTTCTGATCCTTGCAGGCGATGCATTTAAGGTTTGGAGTAACGATAGGATACACTGTTGTGAACACCGAGTGATTATAAAAGGAAAGAAGGACAGGTACTCCATGGGACTATTTTCACTTGGCGGCAAGATGGTTGAAACGCCAGAAGAGCTAGTTGATGAAGACCATCCAAGACGTTATAAGCCATTTGATCATTATGAATACCTACGTTTCTATGCAACAAAAAAGGCCTTAGAATCCGAGTGTCGAATCAAAGCATTCTGCGGCATAGACTATGCTAATGAAAAGTGA 960 0.4125 MGSQTACQVPIVDFTDEELKPGTAKWASACLVIRSALEDHGCFYALCDKVPMDLYNSVFALMEELFYLPLETKLQKMSDKPYHGYYGQFTHLPLYESLGINDPLTMEGVQNFTKLMWPAGYDHFCETLSLYAKLLVELDHMAKRMVFDGYGLDQRHCDSLLESTNYMLRSFKYRLPQKDENNLGLHAHTDTSFFTILHQNNVNGLQVKLKNGEWVDIDLSPFMLLILAGDAFKVWSNDRIHCCEHRVIIKGKKDRYSMGLFSLGGKMVETPEELVDEDHPRRYKPFDHYEYLRFYATKKALESECRIKAFCGIDYANEK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01909 319 Gene3D - 7 316 IPR027443 -
Gma08g01909 319 Pfam 2OG-Fe(II) oxygenase superfamily 172 261 IPR044861 -
Gma08g01909 319 SUPERFAMILY Clavaminate synthase-like 6 298 - -
Gma08g01909 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Gma08g01909 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 89 IPR026992 -
Gma08g01909 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 312 - -
Gma08g01909 319 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01909 Gma-Chr8 17189970 17191743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01909 176 310 Glycosyltransferase AT5G59530 33.333 3.05e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01909 - - gmx:100794707 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01909 08 17189970 17191743 Gma08g01909 08 17189970 17191743 ECH
Gma07g00315 07 2678532 2680150 Gma08g01909 08 17189970 17191743 GST