Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01908 ATGGGTTCAGAAGCCACTCTAAAGCTTCCGGTCATCGACTTTACTAACCTCAAATTGGAAGCCAACAATCCTAATTGGGAGGCAGTAAAATCCCAAGTTCACAAGGCACTGGTAGATTATGGTTGCTTTGAAGCAATTTTTGATAAAGTTCCTTTAGAACTTCGCAAAGCCATATTTGCTGCACTACAAGAGCTCTTTGATCTCCCTCTACAAACAAAGATACTCAATGTGTCTAAGAAGCCTTATCATGGTTATGTTGGGCAATATCCTATGGAGAATGTAGAAAACATGACCAACATCATGTGGCCTCATGGAAACCCAAGTTTTGGGCATGTACCTATTAAAATCAAAGCTATACAATCCTTCTCTGAGCAGCTATCAGAGTTGGATCAAATCATTAGGAAGATGATTTTGGAGAGCTTGGGTGTTGAAGAGTACTTGGAAGAGCACATGAACTCAACCAATTATCTTCTCCGGGCCTCAGCACACACTGACAAGAACATAGTGACCATATTGTACCAAAATGAAGTGGAGGGTTTAGAGGTGATGAACAAAGATGGAAAATGGATTAGCTACAAGCCTTCCCCTGACAGTTTTGTTGTCATGATTGGTGACTCTCTCCATGCATGGTCAAACGGAAGGCTGCATTCACCCTTTCACCGAGTGATAATGAGTGGGAATGAGGCAAGATACTCTGCAGGGCTATTCTCTATCCCCAAAGGAGGGAGCATTATAAAAGCCCCAGAGGAGCTTGTGGATGAGGAACACCCTCTGCTCTTTAAGCCTTTTGATCATGTTGAGTTCCTCAAGTCTTATTACACTGAACAGGGCCAGAGAGATCAATCTGCACTGCGCACTTACTGTGGTGTTTGA 873 0.4296 MGSEATLKLPVIDFTNLKLEANNPNWEAVKSQVHKALVDYGCFEAIFDKVPLELRKAIFAALQELFDLPLQTKILNVSKKPYHGYVGQYPMENVENMTNIMWPHGNPSFGHVPIKIKAIQSFSEQLSELDQIIRKMILESLGVEEYLEEHMNSTNYLLRASAHTDKNIVTILYQNEVEGLEVMNKDGKWISYKPSPDSFVVMIGDSLHAWSNGRLHSPFHRVIMSGNEARYSAGLFSIPKGGSIIKAPEELVDEEHPLLFKPFDHVEFLKSYYTEQGQRDQSALRTYCGV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01908 290 Gene3D - 2 280 IPR027443 -
Gma08g01908 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 289 - -
Gma08g01908 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 289 - -
Gma08g01908 290 Pfam 2OG-Fe(II) oxygenase superfamily 143 236 IPR044861 -
Gma08g01908 290 SUPERFAMILY Clavaminate synthase-like 6 276 - -
Gma08g01908 290 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Gma08g01908 290 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 137 239 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01908 Gma-Chr8 17184594 17185899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01908 3 273 Glycosyltransferase AT5G59530 22.772 2.27e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01908 - - gmx:100784444 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01908 08 17184594 17185899 Gma08g01908 08 17184594 17185899 ECH
Gma07g00316 07 2684617 2686111 Gma08g01908 08 17184594 17185899 GST