Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01880 ATGCGTGTTCGGCGCATGTCCAGGTCGGAAACAGGGATATCACTGTTTCGGGCCGTGTCGTTCTCGGGGGAAACTGTTGGCATTATTGGGCTAGGAAGGATTGGCCAAGCAATTGCTAAGAGAGCCGAAGGATTCAACTGTCCCATATGCTACTACTCTAGAACTGAAAAAAGAGACTCAAAATACAAGTACTATCCAAGTGTTGTAGAACTAGCATCTAAGTGCGAGATACTGGTAGTTGCTTGCCCACTAACGGAGGAAACTCATCACATCATCAACAGGGAGGTGATCAATGCACTGGGTCCCAAGGGTTATCTTATTAACATTGGACGAGGCAAGCATGTTGATGAGGCAGAGTTAGTGCCAGCACTGCTAGAAGGTCTTTTGGGTGGTGCTGGGCTAGATGTGTTTGAAAATGAGCCTACTGTTCCAGAAGAATTATTCGGGCTTGAAAACGTTGTCTTGTTGCcccatgttgcggACGATACGATCAAGGTCGTTAAAGGAACTGAGAATCAGCACACACACTGGGAATATATAGCAGATGTCAAGTTGATGTCCCATATAGTGAACGCCATTTCAGTTGAGGAATTTATCTCCTTATATCTTTAG 612 0.4412 MRVRRMSRSETGISLFRAVSFSGETVGIIGLGRIGQAIAKRAEGFNCPICYYSRTEKRDSKYKYYPSVVELASKCEILVVACPLTEETHHIINREVINALGPKGYLINIGRGKHVDEAELVPALLEGLLGGAGLDVFENEPTVPEELFGLENVVLLPHVADDTIKVVKGTENQHTHWEYIADVKLMSHIVNAISVEEFISLYL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01880 203 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 18 168 - -
Gma08g01880 203 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 16 160 IPR006140 GO:0051287
Gma08g01880 203 Gene3D - 1 163 - -
Gma08g01880 203 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 168 - -
Gma08g01880 203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 160 IPR036291 -
Gma08g01880 203 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 26 53 IPR029752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01880 Gma-Chr8 16906253 16907999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01880 - K18606 gsj:114423958 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00188 07 1587844 1590127 Gma08g01880 08 16906253 16907999 GST