Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01878 ATGGCTTCTCTTGCAACCTTAGCTGCTGTTCAACCAGCTGCGCTCAATGGCCTTGCTGGAAGTTCCCTCTCTGGAACTAAGCTCTCTTTCAAGCCCTCTCGCCACACTGTCAAATCCAAGAACTTCAGGAGTGGTGCCGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTGGGCAACACTACGGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAGTTCTTCGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTACTCAAGTTTCTGATATTGGGAGGTGGTTCCACCCTTGCATACTTCAGTGCAACAGCCTCAGGTGACATTCTACCAATCAAGAAGGGACCACAACTTCCACCAAAGCTTGGTCCTCGTGGCAAGATCTAA 435 0.4943 MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01878 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 144 - -
Gma08g01878 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Gma08g01878 144 Gene3D - 98 120 - -
Gma08g01878 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01878 Gma-Chr8 16897710 16899500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01878 K02695 - gmx:100811201 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01878 08 16897710 16899500 Gma08g01878 08 16897710 16899500 ECH
Gma07g00186 07 1579768 1581200 Gma08g01878 08 16897710 16899500 GST