Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01873 ATGGAGAAGATGAAAATAGAAGAGGTTCAATCAACCACGAAGAAACAGCGTGTTGCTACACACACTCACATTAAAGGCCTAGGTCTCGAGGCGAGTGGAAAAGCATTGAGTTTTGCTGCTGGGTTCGTTGGACAAGTTGAGGCAAGAGAAGCATCAGGTCTTGTGGTGGACATGATACGGCAGAAGAAGATGGCCGGCCGGGCACTTCTTCTCGCCGGACCGCCCGGGACCGGCAAGACGGCATTGGCACTTGGAATAAGCCAGGAGCTTGGCACCAAGGTACCGTTCTGCCCTATGGTTGGCTCCGAAGTTTACTCCTCGGAAGTAAAGAAGACTGAGGTTCTCATGGAAAATTTTCGACGGGCCATTGGTCTGCGTATCAAGGAAAACAAGGAAGTATACGAAGGGGAGGTCACCGAGCTCTCTCCAGAAGAAACTGAGAGCGTAACAGGTGGTTATGGTAAAAGTATTAGCCATGTCATCATTGGATTGAAGACAGTGAAAGGAACAAAGCAACTCAAGTTGGATCCTACCATATATGATGCCTTGATTAAGGAAAAGATAGCTGTTGGCGATGTTATATACATTGAGGCAAATAGCGGGGCTGTAAAAAGGGTGGGTCGAAGTGATGCTTTCGCTACAGAGTTTGACCTTGAAGCTGAAGAGTATGTTCCACTGCCTAAGGGAGAGGTTCACAAAAAAAAGGAGATTGTTCAGGATGTTACCCTACATGATCTGGATGCTGCCAATGCACGACCTCAAGGGGGACAAGATATTCTGTCTCTGATGGGTCAGATGATGAAGCCCAGGAAAACAGAAATCACTGACAAGTTGAGGCAAGAGATTAACAAGGTTGTTAACCGATATATTGATGAAGGTGTAGCAGAGCTTGTTCCTGGAGTTCTATTCATTGATGAGGTTCATATGCTAGATATGGAGTGTTTTTCGTATTTGAATCGTGCTTTAGAGAGCTCCCTATCTCCAATAGTAATCTTTGCTACTAATAGAGGAATATGCAATGTAAGAGGAACTGATATGACAAGTCCTCATGGCATACCTGTTGACCTGTTGGATCGGTTGGTGATCATTCGAACGCAAACATATGGTCCTGCTGAAATGATACAGATTCTAGCTATCCGTGCTCAAGTAGAGGAACTGGTTGTGGATGAAGAAAGTTTAGCTTTCCTTGGGGAGATTGGACAACAAACATCTTTAAGGCATGCAGTTCAACTGTTATCACCTGCCAGCATTGTTGCAAAAATGAATGGCCGAGACAACATCTGCAAGGCGGATCTTGAGGAAGTTTGTACGCTATATTTGGATGCCAAATCATCGGCCAGGTTACTTCAAGAGCAGCAGGAGAAATACATTTCATAA 1377 0.4503 MEKMKIEEVQSTTKKQRVATHTHIKGLGLEASGKALSFAAGFVGQVEAREASGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKIAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQQTSLRHAVQLLSPASIVAKMNGRDNICKADLEEVCTLYLDAKSSARLLQEQQEKYIS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01873 458 Pfam TIP49 P-loop domain 17 368 IPR010339 GO:0005524
Gma08g01873 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 437 IPR027417 -
Gma08g01873 458 SMART AAA_5 65 367 IPR003593 -
Gma08g01873 458 CDD AAA 66 133 - -
Gma08g01873 458 Gene3D - 368 458 - -
Gma08g01873 458 Gene3D - 13 365 IPR027417 -
Gma08g01873 458 PANTHER RUVB-RELATED REPTIN AND PONTIN 3 458 IPR027238 GO:0008094
Gma08g01873 458 Gene3D - 122 247 IPR042487 -
Gma08g01873 458 Pfam TIP49 AAA-lid domain 376 441 IPR041048 -
Gma08g01873 458 PANTHER RUVB-LIKE HELICASE 3 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01873 Gma-Chr8 16846585 16850439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01873 K04499 - gmx:100809596 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00182 07 1531239 1534870 Gma08g01873 08 16846585 16850439 GST