Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01870 ATGGAGAAGGAAATGGAGCTTTGTACAAGTGAAGTGGAAATGGCTTCTCAACACAGTCCACAACCACAGAAGAAAAAGGGTGGTATTGTTACCATGCCTTTCATCATGGCAAATGAAGCACTTGCAAGCGTGGCGAATATCGGTCTTCAGCCGAACATGATATTGTATTTGATGGGGAGTTACAGGTTTCATTTAGCCAAAGCAACTCAGGTGTTTCTGTTATCCTCTGCAACAAGCAATCTCACGCCACTCATAGGTGCTTTCATTGCTGATTCTTGTCTTGGTCGATTCCTAGCTGTTGGGTTAGGTTCTGCCATCTCTTTCCTGGGAATGGCACTCTTGTGTCTAACAGCGATGATCCCACAGTCTCGGCCTCCTCCTTGCAACCCTGCAACTGAAAGATGTAAACCAGCAACAGCTGGCCAAATGGCAATGTTAATCTCTTCCTTTGCTCTCATGTCGATTGGAAATGGTGGCCTTTCATGCTCCATCGCATTTGGCGCAGACCAGGTGAATAAAAAAGATAACCCCAACAACCAGAGGGCCTTAGAAACATTTTTCAGCTGGTATTATGCTTCTACAGCTTTTTCTGTCATAATTGCCCTCACAGTCATAGTATATATCCAAGATCATTTTGGATGGAAAGTAGGTTTTGGAGTTCCAGCAGCACTTATGTTCATGTCCACTTTCTTCTTCTTTCTTGCTTCTCCGCTTTATGTAAAGAATAAAATACAAGGCAGCTTAATCACTGGCTTAGCACAAGTAATTGTCGTGGCCTATAAGAACCGGAAGCTTCCTTTACCACCTAGGAACTCAGCTGAAATGTACCATCATAGGAAGGACTCTGATCTTGTTGTTCCTACTGACAAACTAAGgtttctgaataaagcttgcatcatcaaagatatagcctctgatggatcagcttcaaatccgtggagtctctgcacAATAGATCAAGTGGAAGAACTAAAAGCTATTATTAAAGTTATTCCACTGTGGTCTACAGGGATCATGATGTCAGTTAACATTGGAGGCTCGTTTGGAATACTGCAAGCTAAATCCCTCAACAGACATATCACTTCACACTTTGAAATTCCAGCAGGTTCTTTTTCTGTAGTAATCGTATTTATGGTATTCATATGGGTGGCTCTTTATGATCGTGTCATTATTCCTATAGCATCAAAGCTCAGAGGCAAACCAGTTAGGATCAGTGCCAAGAGAAGAATGGGAATTGGGTTGGTTTTCTCTTTTCTCCACTTGGCAACTGCAGCTATTGTGGAGAATACAAGGCGAAGGAGAGCAATCAGGGAGGGACATATTGATGACACAAATGCAGTGTTGAATATGTCTGCAATGTGGCTTGTTCCTCAACTTTGCTTGTCAGGCATGGCTGAAGCATTCAATGCTATAGGCCAAAATGAGTTTTATTACACTGAGTTTCCAAGAACTATGTCAAGTATTGCTGCTTGCCTTTTTGGACTTGGAATGGCTGCAGGAAATGTGTTATCTAGTTTGATATTCAGCATCGTGGAAAATGTTACTTCAAGGGGAGGAAAGCAAGGATGGGTTTTAGATAATATTAACAAGGGTAGTTATGACAGGTACTACTGTGTTCTTGCTTCACTGGCTGCTGTTAATATACTGTATTATCTAGTGTGCAGTTGGGCTTATGTACCCACAGTTGATCAACTATCCAATGTTTCTGACGAAAATAATTCAAATGAGAAAGTATTAATTCAATTGGGCAATATGAGCCAGGTAGATCTTAGTGAAGGATTTGGGTCAAATGAGAAAAGAGTTAACTAG 1809 0.3964 MEKEMELCTSEVEMASQHSPQPQKKKGGIVTMPFIMANEALASVANIGLQPNMILYLMGSYRFHLAKATQVFLLSSATSNLTPLIGAFIADSCLGRFLAVGLGSAISFLGMALLCLTAMIPQSRPPPCNPATERCKPATAGQMAMLISSFALMSIGNGGLSCSIAFGADQVNKKDNPNNQRALETFFSWYYASTAFSVIIALTVIVYIQDHFGWKVGFGVPAALMFMSTFFFFLASPLYVKNKIQGSLITGLAQVIVVAYKNRKLPLPPRNSAEMYHHRKDSDLVVPTDKLRFLNKACIIKDIASDGSASNPWSLCTIDQVEELKAIIKVIPLWSTGIMMSVNIGGSFGILQAKSLNRHITSHFEIPAGSFSVVIVFMVFIWVALYDRVIIPIASKLRGKPVRISAKRRMGIGLVFSFLHLATAAIVENTRRRRAIREGHIDDTNAVLNMSAMWLVPQLCLSGMAEAFNAIGQNEFYYTEFPRTMSSIAACLFGLGMAAGNVLSSLIFSIVENVTSRGGKQGWVLDNINKGSYDRYYCVLASLAAVNILYYLVCSWAYVPTVDQLSNVSDENNSNEKVLIQLGNMSQVDLSEGFGSNEKRVN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01870 602 MobiDBLite consensus disorder prediction 1 25 - -
Gma08g01870 602 CDD MFS_NPF1_2 32 558 - -
Gma08g01870 602 Pfam POT family 99 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma08g01870 602 SUPERFAMILY MFS general substrate transporter 21 555 IPR036259 -
Gma08g01870 602 PANTHER PEPTIDE/NITRATE TRANSPORTER 16 576 - -
Gma08g01870 602 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma08g01870 602 Gene3D MFS general substrate transporter like domains 2 567 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01870 Gma-Chr8 16839003 16843316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01870 5 582 Organic Solute Cotransporters AT1G52190 55.763 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01870 - K14638 gmx:100808510 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00180 07 1523398 1527507 Gma08g01870 08 16839003 16843316 GST
Gma15g00166 15 1330794 1336069 Gma08g01870 08 16839003 16843316 PCT
Gma08g01870 08 16839003 16843316 Gma15g00166 15 1330794 1336069 PCT