Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01869 ATGGAGATGGAAGTAGAACTTTCTTCAGCTCAACCCAAAATGGGTTCTCAGCTTATTTCCCAACCCCAAAGGTGTGGTAAGGGTGGCCTCGTTACCATGCCTTTTATCATAGCGAATGAAGCACTTGCGAGGGTGGCAACTTTGGGGCTTCTACCCAATATGATATTGTATTTGATGGGAAACTACAATCTTCATTTAGGCAAAGCTACCAAGATACTCCTCTTATCAGTTGCCACCACCAATTTCATGCCTCTTCCCGGTGCCTTCATTTCTGATTCTTATCTGGGTCGCTTTCTCGCTGTTGGTTTAGGTTCCTTCATTACTTTCCTGGGAATGGCACTGTTGTGGCTAACAGCCATGATCCCACAGGCACGGCCTCCGGCTTGCAATTCTCAAAGTGAAAGATGTGAATCAGCAACACCTGGGCAAATGGCAATGTTAATCTCTTCCCTTGCTCTCATGTCCATTGGAAATGGTGGCCTTTCATGTTCCCTGGCCTTTGGTGCTGACCAGGTGAATAGAAAAGGTAACCCCAATAATCAAAGGGCCTTGGAGATGTTCTTCAGCTGGTACTATGCTTCGTCAGCGATATCAGTCATAATTGCCTTCACTGGAATTGTATATATCCAAGATCATCTTGGATGGAAATTGGGTTTTGGAGTTCCAGCAGCACTTATGTTCTTGTCCACTTTTTTCTTCTTTTTGGCTTCTCCACTTTATGTAAAGAATAAAACACACAGCAACTTGCTCACTGGCTTTGCACGTGTGATTGTTGTAGCCTATAAGAACAGGAAACTTCGATTACCACATAAGATCTCAGATGGAATGTATCATCGTAACAAGGACTCTGATCTAGTTGTTCCATCTGATAAACTAAGGTTTCTGAATAAAGCTTGCTTCATTAAAGACTCAGAAAAAGATATAACCTCTGATGGGTCAGCTTCAAATCCGTGGAGTCTCTGTACAGTTGATCAAGTAGAAGAACTAAAAGCTATTATTAAAGTTATTCCCATGTGGTCTACGGGGATCTTGATGTATCTTAACATTGGAGGCTCTTTTGGATTGCTGCAAGCTAAATCCCTTAACCGACATATCACTCCAAATTTCGAAGTTCCAGCTGGTTCTATGAGCGTAATCATGATATTTACAATATTTATTTGGATAGCTCTTTATGATCGTCTCATTATTCCTCTAGCATCGAAGATCAGAGGCAAACCAGTTAGGATCAGTGCCAAGAGAAGAATGGGACTTGGGTTGCTTTTCTCTTTTCTGCACTTGGTAACTGCTGCAATGGTTGAGACTATAAGGCGAAGGAGAGCAATTAGTGAGGGACATGTTAACGACACACATGCAGTGTTGAATATGTCTGCAATGTGGCTCTTCCCTCAACTTTGCTTGGGTGGCATAGCTGAAGCATTCAATGCAATAGGCCAAAATGAGTTCTATTACACCGAGTTTCCTAAGACTATGTCGAGCATTGCTTCTTCCCTTTTTGGACTAGGAATGGCTGTAGGATACGTGTTATCTTCTTTGGTATTCAGTGTTGTGGAAAAGGTTACTTCAAGAGGGGGAAAAGATGGATGGGTTTCAGATAACATTAACAAGGGTCGTTTCGACAAGTACTACTGGCTTCTTGCCACACTCAGTGCTGTTAATGTACTGTATTATCTAGTATGCAGTTGGATTTATGGACCAACTGCTGATCAAGAATCAAAGGTAACTGAAGAAAATGGTTCCAATGAGGAAGAATTGCCATTAATTTAA 1764 0.4184 MEMEVELSSAQPKMGSQLISQPQRCGKGGLVTMPFIIANEALARVATLGLLPNMILYLMGNYNLHLGKATKILLLSVATTNFMPLPGAFISDSYLGRFLAVGLGSFITFLGMALLWLTAMIPQARPPACNSQSERCESATPGQMAMLISSLALMSIGNGGLSCSLAFGADQVNRKGNPNNQRALEMFFSWYYASSAISVIIAFTGIVYIQDHLGWKLGFGVPAALMFLSTFFFFLASPLYVKNKTHSNLLTGFARVIVVAYKNRKLRLPHKISDGMYHRNKDSDLVVPSDKLRFLNKACFIKDSEKDITSDGSASNPWSLCTVDQVEELKAIIKVIPMWSTGILMYLNIGGSFGLLQAKSLNRHITPNFEVPAGSMSVIMIFTIFIWIALYDRLIIPLASKIRGKPVRISAKRRMGLGLLFSFLHLVTAAMVETIRRRRAISEGHVNDTHAVLNMSAMWLFPQLCLGGIAEAFNAIGQNEFYYTEFPKTMSSIASSLFGLGMAVGYVLSSLVFSVVEKVTSRGGKDGWVSDNINKGRFDKYYWLLATLSAVNVLYYLVCSWIYGPTADQESKVTEENGSNEEELPLI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01869 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma08g01869 587 Gene3D MFS general substrate transporter like domains 13 572 IPR036259 -
Gma08g01869 587 CDD MFS_NPF1_2 33 563 - -
Gma08g01869 587 SUPERFAMILY MFS general substrate transporter 48 560 IPR036259 -
Gma08g01869 587 Pfam POT family 100 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma08g01869 587 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 87 111 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gma08g01869 587 PANTHER PEPTIDE/NITRATE TRANSPORTER 20 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01869 Gma-Chr8 16832795 16835374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01869 17 583 Organic Solute Cotransporters AT1G52190 57.391 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01869 - K14638 gmx:100807986 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01869 08 16832795 16835374 Gma08g01869 08 16832795 16835374 ECH
Gma07g00179 07 1516094 1519138 Gma08g01869 08 16832795 16835374 GST
Gma15g00167 15 1340418 1343829 Gma08g01869 08 16832795 16835374 PCT
Gma08g01869 08 16832795 16835374 Gma15g00167 15 1340418 1343829 PCT