Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01860 ATGGCTACTCACTTCAATCTGCAACACCAACTATTTAACTACTCCAGATCCGTGGGATTAGATATCAGACAAAGAACAACGGCTTATGCCAATTCAAATGCATTATATGAGAGAAACAACAATTCTTTGAATAGTGGCCTGCTAGTTGGATCTCTGTCTGTATGTTACACATCCTTAAAGAAGTGCTCATCATTGGCAGCATCAACTAAGGCTCATTTTTCCTGTACTGATGATCAAAGCAAAGAAGCAGATGAGGTTACCAATGTTACATCCACTAGTCAGGGAATGAAATTTAATAGGGTGGATTGTGTTGTGTGGTTATTGCATGAATCTTCCAGGAGCTTTTCCGAAGCAATCAACTCGCTCGGACTAGCAAGGAGTGGTCCAGCTCTTGCAATGGCTTGGATTGGGAAGGATGTGCATGAATGGCATAGACGTATTGCTTATCAGGTTGCAGTTCATGCTTTAATTAAAGCAGCAATTGGTTTGGAGATATTGCTTTCACATGAACGGCTAAATGAATTTTCCCCTGTTAAAGAGATTCTGAGCCCAATAATGAATCAAATAGGAGAGCACATTGAAATTCGACTGAAAATGAAGCATCCGTATTTGGTGCAGTGGTTTAGAGAGACTGAAATGCCACGAATAGCTGGATATTTTATTCCACTTCTAAAAAAGTGGTCTGTGGAATATGCAGGAAGCGGTATTGCAGGAATTATTGTGGCTATAACCTGTTGTAGTGCAGTGGTGAAATTGGGCGCTAGGCGCATCTGCTGCCCCTTACTTGTATTGTCTCTTGAAGATGTTTTGGTCAAGCTCATGGATTTCTCACTCAATCTTGCACCTGTGGACAAGTTACACCGGTTAGCAACTGAGGCGGGATTTGAACTGAATTTCTTGTCCCATTTTGGTGGGAAGGTCTTTCCCAATGAGAAAACTGAGGACCTAGAGTTTTTGATTGGTTTGGCCCATAAGAAATTATTGAAAGCTTTCTGTGAAGAAAGCATCACTTCAAAGAAGCAAAATTTTCAGCAAAAGATAGAAGCAGATAGCTTGGCCACATTGGGACTTTTTACATATCTTGGAAGAAGGACTAGAATATTTTTGTCAGCAATGGGCATTAAGGATCTTGACGGAGTAATTATGAACTTCCTCAGTTACTTGGAATGTGGAATTCTTTTTGTTTATCCAGAATTTTCCTCCATTCGAGTGTATCAGTGTTTCATGGAGGTGGTAACTGAGGAGATAGGATGGCTTGATTTTTATGGTTCATATGTTCAAATAAATTGCAAGGAGAAAAGGTCTAAATATAATGCTCGCCAGGCAGAGAAAGAGATAATTTCTTCTGTAGTGTTTACTGTATGCTATGATGTTTTCTCTGGATTTGCACACTTCAATCGCTCAACTCAACAATCATTGGACACAGCTTCGCGCTCATACTTGCTTCGTTGTCAGGGTTTGTTAAGTATTTGTCTGCAATATCACTGGGCTGCTTATGACAATTCAGGTGAATCACTAAATACTGCGGATCATGCTGCATTTGACAACCATACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTCTGGTGTTTGAAGTGCAGCAGATGCCACATGATTTAACTACAGAAGGATGTCCAAAGAACAATTTTCAAAACAGTTGTATATTCAATAAGGCTCCAATTTCAGCAATCACGAATAAGAAAACATACGAGGAAGATACCTGTGTCGACAAGTCAAATCCTCAGCATGAAAGTTTTATCAAGAGATACAGCATCAAGTTGGCATCCACAAGTGCAGACCTCTGGATGGGTATTGTATTGCTCTTCATAGACATTATGGTTGCTTTAGAAATACTTGTAAGGCAAGTGCACGGCTGCAAGGCTTCCGGGAGTCAAAGAAAGAGACTAAACAGAACCATGACTGACATTATTGTGCTAATTCCAGTGACAATCTTGATGCTAATTCCTGTAACAGCTGTAGGCCATGCAGCTATTCTAGCAGCTATCAAGAAGTATATGCCATGCTTGATCCCCTCCTCTTTTTCTTCAGAGCGGTTGGATGTTGTAAAGCAAATAAAGCGAACTAGAGAGATGGGTTATCAGTTACATTTGGCTCAGTTTGACCTTGAAGATCAACCAGCAACCACTTCTTGA 2160 0.4028 MATHFNLQHQLFNYSRSVGLDIRQRTTAYANSNALYERNNNSLNSGLLVGSLSVCYTSLKKCSSLAASTKAHFSCTDDQSKEADEVTNVTSTSQGMKFNRVDCVVWLLHESSRSFSEAINSLGLARSGPALAMAWIGKDVHEWHRRIAYQVAVHALIKAAIGLEILLSHERLNEFSPVKEILSPIMNQIGEHIEIRLKMKHPYLVQWFRETEMPRIAGYFIPLLKKWSVEYAGSGIAGIIVAITCCSAVVKLGARRICCPLLVLSLEDVLVKLMDFSLNLAPVDKLHRLATEAGFELNFLSHFGGKVFPNEKTEDLEFLIGLAHKKLLKAFCEESITSKKQNFQQKIEADSLATLGLFTYLGRRTRIFLSAMGIKDLDGVIMNFLSYLECGILFVYPEFSSIRVYQCFMEVVTEEIGWLDFYGSYVQINCKEKRSKYNARQAEKEIISSVVFTVCYDVFSGFAHFNRSTQQSLDTASRSYLLRCQGLLSICLQYHWAAYDNSGESLNTADHAAFDNHTSYMGSINGPKLPLVFEVQQMPHDLTTEGCPKNNFQNSCIFNKAPISAITNKKTYEEDTCVDKSNPQHESFIKRYSIKLASTSADLWMGIVLLFIDIMVALEILVRQVHGCKASGSQRKRLNRTMTDIIVLIPVTILMLIPVTAVGHAAILAAIKKYMPCLIPSSFSSERLDVVKQIKRTREMGYQLHLAQFDLEDQPATTS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01860 719 PANTHER LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1 17 710 - -
Gma08g01860 719 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 17 710 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01860 Gma-Chr8 16746511 16752730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01860 595 683 EF-hand Containing Proteins AT3G59820 29.213 4.24e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01860 - - gmx:100787840 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01860 08 16746511 16752730 Gma08g01860 08 16746511 16752730 ECH
Gma07g00168 07 1438952 1445294 Gma08g01860 08 16746511 16752730 GST