Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01845 ATGGACAGAAACCAATCCCGCAGGCAGGTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTTGATGAACAGTTTATCCAACTGGAAGAATTGCAGGATGATGCAAATCCTAACTTTGTTGAAGAAATTGTGACTCTTCATTACCGTGATTCGTCGCGGCTTATCTCAAGCATAGAGCAGGCTCTCAAAGAGAGGAACCCTCTGGATTTCAACAAGCTGGACACACTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAACAGAGTGTAATCTGTTCAGAGAATATTGCAGGGCAGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAACTGAAGAGAGAATATGCAGCACTGAGAAAGAAACTTGAAGCTTATTTTCAGTTAGCTAGGCAAGCTGGACCCCAGGAAACAGCATGTCGCTCCAAATGA 456 0.4452 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKTECNLFREYCRAGNAEGCMRSFQQLKREYAALRKKLEAYFQLARQAGPQETACRSK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01845 151 CDD HPT 42 132 IPR008207 GO:0000160
Gma08g01845 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Gma08g01845 151 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 147 - -
Gma08g01845 151 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Gma08g01845 151 PANTHER - 3 147 IPR045871 GO:0000160|GO:0009927|GO:0043424
Gma08g01845 151 Coils Coil 110 137 - -
Gma08g01845 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Gma08g01845 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01845 Gma-Chr8 16556433 16558352 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01845 K14490 - gmx:100798055 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00148 07 1253291 1254937 Gma08g01845 08 16556433 16558352 ECH
Gma15g00191 15 1550083 1551229 Gma08g01845 08 16556433 16558352 ECH
Gma08g01845 08 16556433 16558352 Gma08g01845 08 16556433 16558352 ECH
Gma08g01845 08 16556433 16558352 Gma06g00780 06 7070931 7073560 ECH
Gma07g00148 07 1253291 1254937 Gma08g01845 08 16556433 16558352 GST
Gma13g03174 13 45870719 45871734 Gma08g01845 08 16556433 16558352 PCT
Gma15g00191 15 1550083 1551229 Gma08g01845 08 16556433 16558352 PCT
Gma08g01845 08 16556433 16558352 Gma13g03174 13 45870719 45871734 PCT
Gma08g01845 08 16556433 16558352 Gma15g00191 15 1550083 1551229 PCT