Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01844 ATGGCCTCTTACAGGCCCTTCCCTCCCCAATCGAGTCAAATTCCAAACCCGATCCCAGGTGGGAATCATCAGTATAATAATAATAATAATCAAAATCAAAATTGGGGTGCTTATGGAGATCCCTCTACTTCTTCATTCCCCCAAATCCCTCCAAATTCCAATTATCATCAAAATCAACATCATGTTCCATATGCACCAGCACCTTCAAATCCCCACCACCCTCCTCACTATCCATATCCACCACCACCGCCGCCGCCGCCGCCACCGGAGGCTTCATACCAGCCGCCGCCGCCACCACCACCACCAGCTCCTATGTATTATCCCTCTAGTAGTCAGTATAGCAACCAGCCACCTCCACCGCCaCCGCCCTTGTCGCCACCACCACCACCTCCCCCGGTTTCGCCTCCTCCTCCTCCCCCGGCAACTCAGAACAACAACGAGGAGCGGCGTTTCAAGGAGCCTTCCAAGTCTGGCCGGCGCGAATACGAGCATTCCAATCACGGCATTGCTCACAAACAGCACAAGCAGCAGCAGCCTCCCCTTCCGGTGAAGAAGATGAACAACGGGCCTCCCGGCAGGGCTGAGACCGATGAAGAGAAGAGGTTGAGGAAGAAAAGGGAATTTGAGAAGCAGAGGCAGGAGGAAAAGCATAGGCAGCAGCTGAAGGAGTCCCAGAATACTGTTCTGCAGAAGACTCACCTGTTGTCATCTGGGAAGGGGCATGGCATGATTGCAGGGTCTCGAATGGGTGAAAGGAGATCTACTCCCTTGTTGGGTGCTGAGAGGGTTGAAAATAGGTTGAAGAAGCCCACAACGTTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAACCTAAGCTTATGTCCTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACGTCTCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTATAATCCTCCCAGGGTCAGACCACCCCTTGCTCCAGAAGATGAAGAATTGTTGCGAGATGATGAAGCTGCTACTCCTATTAAAAAAGATGGCATTAAAAGAAAGGAGAGGCCTACTGATAAAGGTGTAGCATGGCTTGTAAAAACACAATATATTTCTCCTCTAAGCATGGAGTCGACAAAGCAGTCTTTAACTGAGAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGTCGTGGCATTTTGGACAATCTCAACAGTAGGGAAAGACAAATTAGGGAAATCCAAGCATCATTTGAAGCAGCTAAGTCTGATCCTGTTCATGCAACCAACAAAGATTTGTATCCTGTTGAGGTTATGCCATTGCTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCCACAGCTGATTCAGAAATGTATGCTAAGATGAACAAATCTGTTCGTGATGCCTTTGAATCAAAGGCAGTTATGAAAAGTTATGTTGCAACGGGTTTGGATCCTGCTAACCCTGAGAAGTTTTTGGCTTATATGGCCCCAGCACCAGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCGTACTCTTGGATTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGATGATCCCACAACATTCTTAGTTGCATTCGATGAGTCAGAAGCACGCTACTTGCCTCTTCCAACTAAACTTGTTTTAAGAAAAAAGAGGGCAAAAGAGGGAAGATCGGGTGATGAAGTTGAGCAATGTCCAGTACCTGCAAGAGTGACTGTAAGGCGAAGGTCTAGTGTTGCTGCGATTGAGCGGAAGGATTCTGGGGTATATACAAGTTCAAAGGGAAATTCCTTTAAGAGAGTTGGCTTAGAAATGGATGATGGTCTCGAAGACCAACATAGAGGTGCACCACACCAGGACAATTATCAGTCTAGTGGAGCAGAAGATTACATGTCTGATTGA 2001 0.4653 MASYRPFPPQSSQIPNPIPGGNHQYNNNNNQNQNWGAYGDPSTSSFPQIPPNSNYHQNQHHVPYAPAPSNPHHPPHYPYPPPPPPPPPPEASYQPPPPPPPPAPMYYPSSSQYSNQPPPPPPPLSPPPPPPPVSPPPPPPATQNNNEERRFKEPSKSGRREYEHSNHGIAHKQHKQQQPPLPVKKMNNGPPGRAETDEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHLLSSGKGHGMIAGSRMGERRSTPLLGAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMSFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPRVRPPLAPEDEELLRDDEAATPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGRGILDNLNSRERQIREIQASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMYAKMNKSVRDAFESKAVMKSYVATGLDPANPEKFLAYMAPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPTTFLVAFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQCPVPARVTVRRRSSVAAIERKDSGVYTSSKGNSFKRVGLEMDDGLEDQHRGAPHQDNYQSSGAEDYMSD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01844 666 MobiDBLite consensus disorder prediction 191 222 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 16 64 - -
Gma08g01844 666 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 249 664 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 651 666 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 633 650 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 67 143 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 622 666 - -
Gma08g01844 666 Pfam Paf1 273 594 IPR007133 GO:0006368|GO:0016570|GO:0016593
Gma08g01844 666 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 249 664 IPR007133 GO:0006368|GO:0016570|GO:0016593
Gma08g01844 666 MobiDBLite consensus disorder prediction 1 263 - -
Gma08g01844 666 MobiDBLite consensus disorder prediction 146 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01844 Gma-Chr8 16548577 16552941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01844 K15174 - gmx:100797526 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01844 08 16548577 16552941 Gma08g01844 08 16548577 16552941 ECH
Gma07g00147 07 1246301 1250621 Gma08g01844 08 16548577 16552941 GST