Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01820 ATGAATTTCTTCAACTGGGTTCATACTTTCATCGTTTTTCATGTCTTTGCTGCAACACCCCACTTCTTCTTATTAGCAGATTCCTCCGAACAACTCCCCACCAACTTTCTAGATGCTGCCAAGAAGCCTGAGGTATTTGATTGGATGGTCAGAATCAGAAGGAAGATTCATGAGAATCCTGAATTGGGTTATGAAGAATTTGAGACCAGTAAACTCATTAGAGAGGAATTGGATAAACTGCGTATCCCATATAAACACCCTGTTGCAATCACTGGTGTTATTGGCTTCATTGGGACAAAAAGATCGCCTTTTGTTGCAATTAGGGCTGATATGGATGCTCTTCCCATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTGACCATGCTTCTTGGTGCTGCAAAGATTCTCAAACAGCATGAAAAGGAGATACAAGGAACTGTAGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTCGCAGCTATTTTTGGGTTGCATGTGACACCTAACTTTCCAATAGGTGAAGTGGCCTCTAGGTCTGGTCCATTGTTGGCAGGAAGTGGTTTCTTTGAAGCAATAATAAGTGGAAAAGGAGGTCATGCAGCTATTCCTCAACAATCTATAGACCCCATATTGGCAACTTCTAATGTTATAATTAGCTTACAGCATCTTGTTTCTCGTGAGGCTGATCCTCTGGATTCCCAGGTTGTGACTGTAGGAAAATTCCAAGGAGGTAATGCATTCAATGTCATTCCAGATTCTGTCACAATTGGAGGCACCTTCCGAGCTTTTTCAAAAGAAAGCTTCCAGCAATTAAGACAGCGCATTGAGCAGGTTGTGATTGCACAAGCTGCGGTTCTGAGGTGCAATGCAACAGTCAATTTCTTTGAGGGAGAGAAGCCTTTCTTTCCTGCAACTATAAACAACAATGACTTGCATGAACATTTTGGGACTGTTGCGGTGAATTTGCTTGGCATCAATAAAGTTAATGACATGCCACCATTGATGGGAGCTGAAGACTTTTCATTCTATCAAGAGGTTATGCCTGGCTACTTTGCCTTTATTGGAATACAGAATCCCTCACATGAAAAACTGGAGCAAGTACACTCACCCTATTTCAAGATCAATGAAGATGTGCTTCCTTATGGGGCTGCACTTCATGCCTCATTAGCTGTTAGTTATCTTCTAAAACATCCGCAGGATGTACCGTCTGCAGAGGGGAAACATCATGATGAATTGTAA 1329 0.4251 MNFFNWVHTFIVFHVFAATPHFFLLADSSEQLPTNFLDAAKKPEVFDWMVRIRRKIHENPELGYEEFETSKLIREELDKLRIPYKHPVAITGVIGFIGTKRSPFVAIRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEIQGTVVLVFQPAEEGGGGAKKILDAGALENVAAIFGLHVTPNFPIGEVASRSGPLLAGSGFFEAIISGKGGHAAIPQQSIDPILATSNVIISLQHLVSREADPLDSQVVTVGKFQGGNAFNVIPDSVTIGGTFRAFSKESFQQLRQRIEQVVIAQAAVLRCNATVNFFEGEKPFFPATINNNDLHEHFGTVAVNLLGINKVNDMPPLMGAEDFSFYQEVMPGYFAFIGIQNPSHEKLEQVHSPYFKINEDVLPYGAALHASLAVSYLLKHPQDVPSAEGKHHDEL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01820 442 CDD M20_IAA_Hyd 49 424 IPR044757 GO:0009850|GO:0016787
Gma08g01820 442 Gene3D Zn peptidases 49 409 - -
Gma08g01820 442 Gene3D - 214 332 - -
Gma08g01820 442 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 324 IPR036264 -
Gma08g01820 442 TIGRFAM amidohydrolases: amidohydrolase 49 411 IPR017439 GO:0016787
Gma08g01820 442 Pfam Peptidase family M20/M25/M40 106 420 IPR002933 GO:0016787
Gma08g01820 442 PANTHER AUXIN CONJUGATE HYDROLASE 1 442 - -
Gma08g01820 442 PIRSF Amidohydrol_AmhX 36 428 IPR017439 GO:0016787
Gma08g01820 442 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 442 IPR017439 GO:0016787
Gma08g01820 442 Pfam Peptidase dimerisation domain 215 312 IPR011650 -
Gma08g01820 442 SUPERFAMILY Zn-dependent exopeptidases 44 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01820 Gma-Chr8 16218794 16223356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01820 K21604 K14664 gmx:100789077 892.493