Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01759 ATGGCATCTCAAGGTTTGTGTCCTTCGATAAAAAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGACCTGCATTTCTTTGTCACTGGTGGTGAAGATGAAAATGAGCTCATTCTAGCATCAGTTCTTCAAGGTTTCTTTGATGCAGTCACCCTTCTGTTGAGGAGTAATGTTGACAAAAGAGAGGCACTTGAGAACTTAGATCTCATTCTCCTGTGTCTTGACGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGACCTCTTATTGCCGAAAAGGTGACCTCTCATAGCTTGGATGCTGATGCCCCCTTGTCAGAGCAGACACTAACTCAAGCTTGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 543 0.4052 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01759 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 5 180 - -
Gma08g01759 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Gma08g01759 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Gma08g01759 180 CDD Zeta-COP 11 146 - -
Gma08g01759 180 Gene3D - 4 150 - -
Gma08g01759 180 PANTHER ZETA-COAT PROTEIN 5 180 IPR039652 GO:0006890|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01759 Gma-Chr8 15668074 15671436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01759 K20472 - gmx:100775726 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01759 08 15668074 15671436 Gma08g01759 08 15668074 15671436 ECH
Gma07g00073 07 596728 604521 Gma08g01759 08 15668074 15671436 GST