Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01747 ATGTTTTCGGGTGTAACAGGTTTGATAAACAGGGGGCATAAGGTGAAGGGGACAGTGGTGTTGATGCAAAAGAATGTGTTGGACGTAAACGCCCTTACTTCTGCCAAGAGTGTAGGTGGTATCGCGGGCGGTGCACTCGGTGTTGTAGGGGGTGTCATTGGTACCGCAGTGGACACACTCACTTCCTTTTTGGGCCGATCCGTGGCTCTCAGGTTGATCAGTGCCACTAGTTCTGATGGAAGTGGAAAAGGGAAAGTTGGAAAGCAAACATTTTTGGAAGGTATTGTTACCTCCCTTCCAACCTTGGGAGCAGGCCAATCTGCATTCAATGTTCATTTTGAATGGGACACTGACATGGGAATACCTGGAGCGTTTTACATTGAGAATTTTATGCAAGTTGAATTCTTCCTTGTGAGTTTGACTCTTGAAGACATTCCTAACCATGGATCCATCCACTTCCTTTGCAACTCATGGGTTTACAATTCCAAAAAATACAAAAGTGACCGCATTTTCTTTGCAAACAAGACATACCTTCCAAGTGAAACACCGGGTCCACTAGTGAAGTATAGAGAAGAAGAATTGAAGACTTTGAGAGGAGATGGAACAGGAGAGCGCCAAGAACATGAAAGGATCTATGACTATGATGTCTACAATGATTTAGGTGATCCTGACTCCAATGCCAGATTGGCTCGTCCAGTTCTTGGAGGATCCACCACCTTGCCTTACCCTCGTAGGGGAAGAACTGGTAGAAAAAAATCTAAGAAAGATCCTAAAAGTGAGAGTCGCAGTGACTTTGTTTACCTTCCAAGAGATGAATCATTTGGTCACCTGAAGTCATCGGATTTTCTTGTTTATATACTTAAGTCTGCATCTCAAAATGTCATACCCAAATTACAATCTGCACTTAGGCTACAGTTCAATCAGCCTGAGTTTAATAGCTTCGATGACGTGCGAGGACTCTATGATGGTGGAATTAAGTTACCTACTGATACACTTAGCCAGCTTAGCCCTATACCATTGTTCAAAGAACTCTTCAGAACTGATGGCGAACAGGCCCTTAAGTTTCCAACACCTAAAGTGGTTCAAGCAGTGGAGCAGTCTGCATGGATGACTGATGAAGAATTCACAAGAGAAATGATTGCTGGTGTGAATCCACACATTATTAAAAGACTTCAGGAGTTCCCACCAAAGAGCAAGCTAGATAGCCAGCTCTACGGTGATAATACCAGTACAATAGCCAAACAACACTTGGAGCCAAACTTAGGTGGACTCACTGTAGAACAGCAGGCTATCCAACACAACAGATTGTTCATACTAGATCACCATGATACAATCTTTCCTTATTTGAGGAAAATTAATGCAACCGACACCAAGGCCTATGCTACTAGGACCATCATTTTCTTGCAAGATAATGGAACTTTAAAGCCACTAGCCATTGAGCTAAGTAAGCCACATCCTCGGGGTGATAATTATGGTCCTGTTAGTAATGTTTACCTTCCGGCAAACCAAGGTGTTGAAGCTTCTATTTGGCTACTTGCCAAGGCTTATGCAGTCGTAAATGACTCTTGCTTTCACCAACTTGTCAGCCATTGGTTAAACACCCACGCAGTTGTTGAGCCATTCATCATAGCAACAAACAGACATCTTAGTGTGGTTCATCCTATTCACAAGCTTCTGCTTCCACACTATCGTGACACTATGAACATAAATTCACTGGCGCGAAATGTCCTGGTGAATGCAGAGGGTATTATAGAATCAACATTCTTGTGGGGAGGATATTCTTTGGAAATGTCTGCTGTTGTATACAAGGATTGGGTTTTCACTGAGCAAGCACTACCTGCTGATCTTGTTAAGAGAGGTGTGGCTGTTAAGGATTCATCTTCTCCACATGGCCTTCGTCTTTTGATAGAGGACTATCCTTATGCTGCTGATGGATTAGAGATATGGGCTACTATCAAGTCATGGGTCCAAGAATATGTCTCTTTCTACTACAAGTCAGATGCTGCTATTGCACAAGATGCTGAACTCCAAGCCTTTTGGAAAGAACTTGTAGAGGTTGGTCATGGTGACAAGAAAAATGAGCCATGGTGGGGGAAGATGAAAACTCGCCAAGAGTTGATTGATTCTTGCACCATCCTCATATGGACTGCTTCAGCCCTTCATGCAGCTGTTAATTTTGGACAGTATCCATATGGAGGTTACATCCTTAACCGACCAACTCTTAGCAGGCGATTCATGCCTGAGAAAGGGTCTCCTGAGTATGATGAGCTTGCTAAGAACCCTCAAAAGGCGTATTTGAAAACAATTACAGGGAAGAATGAGACCCTTACTGACCTTACAATCATAGAGGTCTTGTCAAGGCATGCTTCTGATGAGTTATACCTTGGACAGAGAGATGGTGGTAATGGTTGGACTTCTGATGCACAGATAATACAAGCCTTCAAGAGATTTGGAAATAAGTTGGCTGAAATTGAGCAAAAGCTCATCCAAAGGAACAATGATGAGACCCTGAGGAATCGATATGGCCCTGTGAAGATGCCTTACACACTGCTTTATCCTTCTAGTGAGGAAGGGTTGACTTTCAGAGGCATTCCTAATAGTATCTCTATCTAA 2613 0.4305 MFSGVTGLINRGHKVKGTVVLMQKNVLDVNALTSAKSVGGIAGGALGVVGGVIGTAVDTLTSFLGRSVALRLISATSSDGSGKGKVGKQTFLEGIVTSLPTLGAGQSAFNVHFEWDTDMGIPGAFYIENFMQVEFFLVSLTLEDIPNHGSIHFLCNSWVYNSKKYKSDRIFFANKTYLPSETPGPLVKYREEELKTLRGDGTGERQEHERIYDYDVYNDLGDPDSNARLARPVLGGSTTLPYPRRGRTGRKKSKKDPKSESRSDFVYLPRDESFGHLKSSDFLVYILKSASQNVIPKLQSALRLQFNQPEFNSFDDVRGLYDGGIKLPTDTLSQLSPIPLFKELFRTDGEQALKFPTPKVVQAVEQSAWMTDEEFTREMIAGVNPHIIKRLQEFPPKSKLDSQLYGDNTSTIAKQHLEPNLGGLTVEQQAIQHNRLFILDHHDTIFPYLRKINATDTKAYATRTIIFLQDNGTLKPLAIELSKPHPRGDNYGPVSNVYLPANQGVEASIWLLAKAYAVVNDSCFHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINSLARNVLVNAEGIIESTFLWGGYSLEMSAVVYKDWVFTEQALPADLVKRGVAVKDSSSPHGLRLLIEDYPYAADGLEIWATIKSWVQEYVSFYYKSDAAIAQDAELQAFWKELVEVGHGDKKNEPWWGKMKTRQELIDSCTILIWTASALHAAVNFGQYPYGGYILNRPTLSRRFMPEKGSPEYDELAKNPQKAYLKTITGKNETLTDLTIIEVLSRHASDELYLGQRDGGNGWTSDAQIIQAFKRFGNKLAEIEQKLIQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTFRGIPNSISI 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01747 870 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 7 870 - -
Gma08g01747 870 PRINTS Lipoxygenase signature 545 565 IPR013819 GO:0016702|GO:0046872
Gma08g01747 870 PRINTS Lipoxygenase signature 507 524 IPR013819 GO:0016702|GO:0046872
Gma08g01747 870 PRINTS Lipoxygenase signature 525 542 IPR013819 GO:0016702|GO:0046872
Gma08g01747 870 CDD PLAT_LH2 13 174 IPR042057 -
Gma08g01747 870 PRINTS Plant lipoxygenase signature 393 412 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 169 190 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 143 161 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 460 484 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 308 329 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 208 224 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 353 369 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 241 260 IPR001246 GO:0016491
Gma08g01747 870 PRINTS Plant lipoxygenase signature 782 796 IPR001246 GO:0016491
Gma08g01747 870 Gene3D - 503 869 - -
Gma08g01747 870 Gene3D - 178 277 - -
Gma08g01747 870 Gene3D - 278 365 IPR027433 -
Gma08g01747 870 ProSiteProfiles PLAT domain profile. 45 173 IPR001024 GO:0005515
Gma08g01747 870 Pfam Lipoxygenase 186 853 IPR013819 GO:0016702|GO:0046872
Gma08g01747 870 MobiDBLite consensus disorder prediction 225 262 - -
Gma08g01747 870 ProSitePatterns Lipoxygenases iron-binding region signature 2. 552 562 IPR020834 GO:0016702|GO:0046872
Gma08g01747 870 Gene3D PLAT/LH2 domain 4 177 - -
Gma08g01747 870 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 870 IPR013819 GO:0016702|GO:0046872
Gma08g01747 870 ProSitePatterns Lipoxygenases iron-binding region signature 1. 525 539 IPR020833 GO:0016702|GO:0046872
Gma08g01747 870 Gene3D - 367 502 - -
Gma08g01747 870 PANTHER LIPOXYGENASE 7 870 IPR000907 GO:0016702|GO:0046872
Gma08g01747 870 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 12 177 IPR036392 GO:0005515
Gma08g01747 870 SMART LH2_4 13 174 IPR001024 GO:0005515
Gma08g01747 870 SUPERFAMILY Lipoxigenase 178 870 IPR036226 -
Gma08g01747 870 Pfam PLAT/LH2 domain 80 172 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01747 Gma-Chr8 15568434 15573271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01747 1 870 Acyl Lipid Metabolism Gene Families AT1G55020 55.793 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01747 K15718 - gmx:100816880 1717.21