Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01745 ATGTCTTCAATGATGGTGAAGGGGAAGGTGGTGTTGATTCGGAAGTATGTGCTTCAAACCATATCCAATGCCAAGGAGCTTGTTGGCAATGGCTTCAACCTAATTGGCTCATCAGTCGAATATGATATTACTAAATCTGTGTTTTTCAACTTGATTAGCCGCACCAAGTCATCCAAGGATAATTATTCAAAAGATGGAAAGGAGGCCTGTTTAGAGAATAATGCTTCGGTGTTACGAAGCTTGGGAGGGAAAGAGGAGGAATTCGACATTTATTTTGAATGGGATGCTACTGAGATGGGAATTCCAGGAGCATTTTACGTAAAAAACCATATGAAAGATGAGTTCTTCCTTGTGAGTATGACTCTTGAATATCCACTTCCAACATGTGACCGCCACAAGGACAAAAACAGTATCATTCACTTTCTTTGTAACTCATGGGTTCACAATCATGGATGCTACAAAACGCATCATCGCATTTTCTTTGACAATAATCCATATCTCCCTGGTAATCAAACACCAGAGGCATTACGAAAGTATAGAGAAGAAGAGTTGGATAATTTAAGAGGAGATGGAACAGGAGAACGCAAGGAATGGGATAGGATCTATGATTATGATGTCTATAATGATTTGGGCTATCTAGATAGTGATGAAAAGGATGATCACCCAATCCTTGGAGGCACCCTCTATCCCTACCCTCGTAGGGTTAGAACTGGCAGAAAACTCCTCAATGACAAAAATATTAATGGTGGTAAATACGAGAAACCTGCAGACAATGTTATTTATGTGCCAAGGGATGAAAATTTCAGTCTGGAGAAGACAACAGATTTCCTTGAATTTGGAAAGAAATCTTTATCTGGAAAAGTGGAACCCTTGCTCCTATCTTTATATTTAAAGCTCACACCGAACGAGTTTAATGGCTTTGAAGAAGTGCAGAGACTGTATGATCAAGAAGGTGGCATAAAGCTGCCTATATCGACCACTATGGGTACTGAAAATGTCCTTAAGTTTCCAACACCTCATGTAATCCAAGCTAGCACATTTGCATGGATGACTGACGAAGAATTTGCAAGAGAGATGATTGCCGGTGTAAACCCAAATGTAATTCGCCTTCTAAAAAGGGAGGATCTCGCACCGCGAAGGAGGCTAGATTGCAAATGTAATCATAGTACAATAACAAAAGAAAAATTGGAGATTAACATGGGTGGGGTCACAGTAGATGAGgcattttgtaataagagattattcatattggattactatgatgcattcatgccatatttgaggaagataaacgagctagattctgcaaaggcttatgccacgaggacattcttgttcttgaaagatgatggaactttgaagccacttgctattgaattaagcaagccgcatcAATGTGTATATGTCCTGCCACATCCACCACATATGCGTCCATCTCCATTTCTACATTATTATTTTCCgagccaagtggtgttgcctgcagacaaaggtgatgatggtacaatttggctattggccaaggcttatgttgttgtaaatgacaccaactatcatcagctcataagccactggttgcatactcatgcagtgatggagccattttccatagcaacacacagacaactcagtgtgcttcaccctatttataaacttcttcatcctcactttcgtgacaccatcaatatcaatgcacttgctaggcaatcgctgattaatgcaggcagcattatagagcaaacatttttgcccgggaagtactctatggagatgtcttcagctgtatacaagaattgggttttcactgaccaagcattaccaactgatctcatcaagagAGGATTGGCAGTTAAGGATCACACTTCCCCACATGGCCTTCGCCTTATGATAAAGGACTATCCTTATGCTGTTGATGGATTAGAAATATGGGATGCTATTAAGACATGGGTCCAAGAGTATGTCAACTTGTATTACTCTAATGATAAGGCAGTTGAAGAAGATACTGAACTGCAAGCATGGTGGAAGGAAGTTGTGGAGAAGGGTCACGGTGACTTAAAAGATAACGAATGGCCTAAAATGAAGACATGTCAAGAGCTTATAGACTCTTGCACTATAATTATATGGATTGGTTCAGCTCTACATGCAGCTGTTAATTTTGGACAGTACCCTTATGGAGGCTATATCCTAAACCGTCCAACTCAAAGCAGAAGATTGCTCCCAGAACCAAAAACCAAAGAGTTGTTCAGCAGAAGCCAGAAGGTGAAGGGGAGGGTGGTGTTGATGCGTAAGAATGTGCTTGACTTCAACAACTTAACGAGTGTGGTAGGGATTGTTGGCACTAGCAAAAGCCTAATTGGCTCAGCAGTTGATGGTGTTACTTCCTTAATGGGCAAATCTGTGTGTATCCAGTTGATTAGTGCTACCAAGGCTGATGCAAATGGAAATGGGATAGTCGGAAAGAAGGCCTATTTGGAAGGTATTATTGCCTCGATACCAACTTTGGGAGCTGGCCAATCTGCATTTAATATTAATTTTAAATGGGACAGTGACATGGGAATTCCTGGAGCATTTATAATAACAAATCATATGAATGTTGAGTTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAACCATGCACTTTGTTTGCAACTCATGGGTTTACAACTATGAAGATTACAAACAGAATCGAATTTTCTTTGTCAACGAGACATATGTTCCAAGTGAAACACCTGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATCCTAAAAGCGAGAGACCAGCAAGCGAGCTTTACATGCCAAGAGATGAAAAATTCGGTCACTTGAAGTCATCAGATTTCCTCACATATGGAATAAAATCATTATCTCAAAAGCTCTTACCTTCGCTCGAAAACGTTTTTGATTCAGACCTCACATGGAATGAGTTTGATAGCTTTGAAGAAGTAAGAGACCTGTATGAAGGTGGAATTAAGGTTCCAACAGGTGTTCTTAGCGACATTAGCCCCATACCAATCTTCAAGGAAATCTTTCGCACTGATGGTGAAAGTGTCCTTCAATTTCCACCACCTCATGTAGTCCAAGTTACTAAATCTGCATGGATGACCGATGACGAATTTGCAAGAGAGATGATTGCAGGTGTAAACCCAAATGTAATTCGTCTTCTTAAAGAGTTCCCCCCACAAAGCAAGCTGGATCCCTCTCTCTATGGTGATCAATCTAGTACAATAACAAAAGAACATTTGGAGATTAACATGGATGGGGTAACAGTAGAAGAGGCTATCCAAAACAACAAATTGTTCATACTAGACCATCATGACACACTAATTCCATATTTGAGGAGAATAAACGCAACTGAGACAAAGGCCTATGCTACTAGAACCATCCTTTTCTTGCAAGATAATGGAACTTTAAAGCCATTGGCCATTGAACTAAGTAAACCACATCCTCAGGGTGATAATTTTGGCCCTGTTAGTGATGTTTACCTTCCAGCAGAACAAGGTGTTGAAGCTTCTATTTGGCTACTTGCCAAGGCTTATGTGATCGTAAATGACTCTTGCTACCACCAGCTTGTCAGCCATTGGTTAAACACTCATGCAGTTGTTGAGCCATTCGTGATAGCAACAAACAGGCATCTTAGTGTTGTGCACCCTATTCACAAACTTCTTCTTCCACACTATCACGACACAATGAACATCAATGCCCTTGCTAGGAATGTCCTGGTGAATGCTGAGGGTATTATAGAATCAACATTCTTCTGGGGAAAATATGCTTTGGAAATGTCTGCTGTTGTATACAAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAGAGGTGTGGCTGTTGAGGATTCATCTTCTCCACATGGTCTTCGTCTTTTGATAGAGGACTATCCTTATGCTGCTGATGGATTAGAGATATGGGCTACTATCAAGTCATGGGTCCAAGAATATGTCTCTTTCTACTACAAGTCAGATGCTGCTATTGCACAAGATGCTGAACTCCAAGCCTTTTGGAAAGAACTAGTAGAGGTTGGCCACGGTGACAAGAAAAATGAGCCATGGTGGGGGAAGATGAAAACTCGCCAAGAGTTGATTGAATCTTGCACCACACTCATTTGGACTGCTTCAGCCCTTCATGCAGCTGTTAATTTTGGACAATATCCTTATGGTGGCTATATCCTTAACCGGCCAACTCTTAGCAGGCGATTCATGCCTGAGATAGGGTCCCCTGAGTATGATGAGCTTGCTAAGAACCCTCAGAAGGCATATTTGAAAACAATTACAGGGAAGAGTGATGCCCTTAAAGACCTTACAATTATAGAGGTCTTGTCAAGGCATGCTTCCGATGAGTTGTACCTTGGACAGAGAGATGGTGGTGAATTTTGGACTTTTGACAAAGAGCCATTAGAGGCCTTCAAGAGGTTTGGAAAGAAGTTGGCAGAAATTGAGCAAAAGCTCATCCAAAGGAACAATGATGAGACACTGAGGAACCGATACGGCCCAGTGCAGATGCCCTACACATTGCTTTATCCTTCTAGTGAAGAAGGGTTGACTTGCAGAGGCATTCCTAACAGCATCTCCATCTAA 4800 0.3673 MSSMMVKGKVVLIRKYVLQTISNAKELVGNGFNLIGSSVEYDITKSVFFNLISRTKSSKDNYSKDGKEACLENNASVLRSLGGKEEEFDIYFEWDATEMGIPGAFYVKNHMKDEFFLVSMTLEYPLPTCDRHKDKNSIIHFLCNSWVHNHGCYKTHHRIFFDNNPYLPGNQTPEALRKYREEELDNLRGDGTGERKEWDRIYDYDVYNDLGYLDSDEKDDHPILGGTLYPYPRRVRTGRKLLNDKNINGGKYEKPADNVIYVPRDENFSLEKTTDFLEFGKKSLSGKVEPLLLSLYLKLTPNEFNGFEEVQRLYDQEGGIKLPISTTMGTENVLKFPTPHVIQASTFAWMTDEEFAREMIAGVNPNVIRLLKREDLAPRRRLDCKCNHSTITKEKLEINMGGVTVDEAFCNKRLFILDYYDAFMPYLRKINELDSAKAYATRTFLFLKDDGTLKPLAIELSKPHQCVYVLPHPPHMRPSPFLHYYFPSQVVLPADKGDDGTIWLLAKAYVVVNDTNYHQLISHWLHTHAVMEPFSIATHRQLSVLHPIYKLLHPHFRDTININALARQSLINAGSIIEQTFLPGKYSMEMSSAVYKNWVFTDQALPTDLIKRGLAVKDHTSPHGLRLMIKDYPYAVDGLEIWDAIKTWVQEYVNLYYSNDKAVEEDTELQAWWKEVVEKGHGDLKDNEWPKMKTCQELIDSCTIIIWIGSALHAAVNFGQYPYGGYILNRPTQSRRLLPEPKTKELFSRSQKVKGRVVLMRKNVLDFNNLTSVVGIVGTSKSLIGSAVDGVTSLMGKSVCIQLISATKADANGNGIVGKKAYLEGIIASIPTLGAGQSAFNINFKWDSDMGIPGAFIITNHMNVEFFLVSLTLEDIPNQGTMHFVCNSWVYNYEDYKQNRIFFVNETYVPSETPGPLVTYREAELQALRGNGTGKRKEWDRVYDYDVYNDLGNPDSGENFARPVLGGSLTHPYPRRGRTGRKPTKKDPKSERPASELYMPRDEKFGHLKSSDFLTYGIKSLSQKLLPSLENVFDSDLTWNEFDSFEEVRDLYEGGIKVPTGVLSDISPIPIFKEIFRTDGESVLQFPPPHVVQVTKSAWMTDDEFAREMIAGVNPNVIRLLKEFPPQSKLDPSLYGDQSSTITKEHLEINMDGVTVEEAIQNNKLFILDHHDTLIPYLRRINATETKAYATRTILFLQDNGTLKPLAIELSKPHPQGDNFGPVSDVYLPAEQGVEASIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSVVHPIHKLLLPHYHDTMNINALARNVLVNAEGIIESTFFWGKYALEMSAVVYKDWVFPEQALPADLVKRGVAVEDSSSPHGLRLLIEDYPYAADGLEIWATIKSWVQEYVSFYYKSDAAIAQDAELQAFWKELVEVGHGDKKNEPWWGKMKTRQELIESCTTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFMPEIGSPEYDELAKNPQKAYLKTITGKSDALKDLTIIEVLSRHASDELYLGQRDGGEFWTFDKEPLEAFKRFGKKLAEIEQKLIQRNNDETLRNRYGPVQMPYTLLYPSSEEGLTCRGIPNSISI 1599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01745 1599 PANTHER LIPOXYGENASE 6 745 IPR000907 GO:0016702|GO:0046872
Gma08g01745 1599 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 166 745 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 ProSiteProfiles PLAT domain profile. 776 904 IPR001024 GO:0005515
Gma08g01745 1599 SUPERFAMILY Lipoxigenase 170 745 IPR036226 -
Gma08g01745 1599 Gene3D - 909 1008 - -
Gma08g01745 1599 PANTHER LIPOXYGENASE 746 1599 IPR000907 GO:0016702|GO:0046872
Gma08g01745 1599 SUPERFAMILY Lipoxigenase 910 1599 IPR036226 -
Gma08g01745 1599 Gene3D - 485 776 - -
Gma08g01745 1599 PRINTS Lipoxygenase signature 1274 1294 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 PRINTS Lipoxygenase signature 1236 1253 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 PRINTS Lipoxygenase signature 1254 1271 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 Gene3D PLAT/LH2 domain 1 166 - -
Gma08g01745 1599 ProSitePatterns Lipoxygenases iron-binding region signature 2. 545 555 IPR020834 GO:0016702|GO:0046872
Gma08g01745 1599 Gene3D - 167 270 - -
Gma08g01745 1599 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 6 166 IPR036392 GO:0005515
Gma08g01745 1599 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 751 908 IPR036392 GO:0005515
Gma08g01745 1599 Gene3D - 1009 1097 IPR027433 -
Gma08g01745 1599 Gene3D - 272 346 IPR027433 -
Gma08g01745 1599 Gene3D - 1232 1598 - -
Gma08g01745 1599 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 6 745 - -
Gma08g01745 1599 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 746 1599 - -
Gma08g01745 1599 CDD PLAT_LH2 752 905 IPR042057 -
Gma08g01745 1599 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 907 1599 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 Pfam PLAT/LH2 domain 806 903 IPR001024 GO:0005515
Gma08g01745 1599 Pfam PLAT/LH2 domain 62 161 IPR001024 GO:0005515
Gma08g01745 1599 ProSitePatterns Lipoxygenases iron-binding region signature 2. 1281 1291 IPR020834 GO:0016702|GO:0046872
Gma08g01745 1599 ProSitePatterns Lipoxygenases iron-binding region signature 1. 518 532 IPR020833 GO:0016702|GO:0046872
Gma08g01745 1599 SMART LH2_4 751 905 IPR001024 GO:0005515
Gma08g01745 1599 SMART LH2_4 4 163 IPR001024 GO:0005515
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 1123 1142 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 1511 1525 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 972 991 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 1039 1060 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 900 921 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 939 955 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 1189 1213 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 1084 1100 IPR001246 GO:0016491
Gma08g01745 1599 PRINTS Plant lipoxygenase signature 874 892 IPR001246 GO:0016491
Gma08g01745 1599 MobiDBLite consensus disorder prediction 958 995 - -
Gma08g01745 1599 Pfam Lipoxygenase 176 747 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 Pfam Lipoxygenase 917 1582 IPR013819 GO:0016702|GO:0046872
Gma08g01745 1599 ProSitePatterns Lipoxygenases iron-binding region signature 1. 1254 1268 IPR020833 GO:0016702|GO:0046872
Gma08g01745 1599 Gene3D - 347 471 - -
Gma08g01745 1599 Gene3D - 1098 1231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01745 Gma-Chr8 15505771 15558944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01745 2 759 Acyl Lipid Metabolism Gene Families AT1G55020 48.082 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01745 K15718 - gmx:100802685 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00251 15 2189669 2193632 Gma08g01745 08 15505771 15558944 PCT