Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01216 ATGCTTCCCAGCACCGACTTCCACCGACTCTGCCTCCACCTCTTTCGCAGAATCGTTCCCGAAGCCCTCCTCTCGTTATGTGATGGGTTGGAGCTGTGGTGGGTTGCACTGTACCCTGGAGAGGCAGAGGCAGAGGGCATTGTCATTCTTGTGGGTCATTTTAATATTCCTGCAGGCTTGCGTGCTGCCAAGGCCACGCTTTCCAATTCGCAAGTTAATGTTGTCCCTGAATGTAAGGCTGTGGTTCTTCCGATGGTGAAACACCCATTTGTTGTTGGTTTCTTGGTTGCTGAGCTTCCATTGGTGGAGGAAAAGTGCCAGAAATCTAAAAGTGATGGGCCAGAAAATCTCATGACTGTTGAGGAACCTTATTCATTTCCTCCCTTTTTGGATTTAGACAAGAAGTCAAGGGAAATTCAGAATCTTCAGGTCAAGGATGAGGCAGTTGGTATGCATAATTTCACTTCTGAGCAAAGATCAAATACTGTCAACATTTCACTCATGGTTATGCTACATTTACGGAAAGCAATGTTAATTCAGCAATCAGCATGGCAAAATAATGTCAGGATGGCTAATCTGGTTGAGCAAATTTCATATGACATTGTTGAAGACCTCTTGGTGCAAGGTGATCGTCTGAGGGATGTTCTCCATCAACTACAGGATACCGTTTATTTGACAAAGACAAATATAGTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTTTACTCACATACTTGCTGAATGCATGTTTGGGGATGTCTCTGCAAATAAAATGAAAAAATCTAGTGAGTCACTTTCTCTAAGTGCTGCTGTCCAGGATATAGAGATGCCACTGCCACCTTTGGCCCTTGCTCCATTGCAACATGGAATCAGATCATGCAATGTTTCTCAAGTATTGGAAGACTTGGTGGATTCAGTGAGACCACTTGCCCAGGGTAAAAAACGTGTAGTAGAACTAAGTGAACTCTCATCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCATTGCACCAGGCTTTCAGCAATCTTATTGAAGGTGCTTTACTAATCACACATGTTGGAGGAAAGGTTGAAATTGTATCTAAGGCAGCACCAGCTGGTGGTACCCTTGTACTTATTGATGATGATGGACCTGACTCGGATGCACTCACTCACACCTCATGGACGAGAACTGTTAGTTATGGCTTTGTCGTCCGCATTGTTTTGCCTTGGATTAAAGATGCTCCTCTTGGAGCTGGGGGAACTCGTGTGGAACTCTGGCTTCCTTCATCAATTGTACAGTCTGATTTGAGCAGCCACGTCCAAGAGGAAAACTTGTTGGGTTTTTACAAGAGACCACGTATCTGA 1356 0.4425 MLPSTDFHRLCLHLFRRIVPEALLSLCDGLELWWVALYPGEAEAEGIVILVGHFNIPAGLRAAKATLSNSQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVEEKCQKSKSDGPENLMTVEEPYSFPPFLDLDKKSREIQNLQVKDEAVGMHNFTSEQRSNTVNISLMVMLHLRKAMLIQQSAWQNNVRMANLVEQISYDIVEDLLVQGDRLRDVLHQLQDTVYLTKTNIVRYNEEAIKKMNGFTHILAECMFGDVSANKMKKSSESLSLSAAVQDIEMPLPPLALAPLQHGIRSCNVSQVLEDLVDSVRPLAQGKKRVVELSELSSSPLLAAVEEPALHQAFSNLIEGALLITHVGGKVEIVSKAAPAGGTLVLIDDDGPDSDALTHTSWTRTVSYGFVVRIVLPWIKDAPLGAGGTRVELWLPSSIVQSDLSSHVQEENLLGFYKRPRI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01216 451 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 1 197 - -
Gma08g01216 451 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 396 435 - -
Gma08g01216 451 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 196 387 - -
Gma08g01216 451 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 293 385 IPR036890 -
Gma08g01216 451 CDD HATPase 339 381 - -
Gma08g01216 451 Gene3D - 262 389 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01216 Gma-Chr8 10319837 10327995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01216 - - gmx:100792515 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01216 08 10319837 10327995 Gma08g01216 08 10319837 10327995 ECH
Gma05g01729 05 38922263 38928423 Gma08g01216 08 10319837 10327995 GST