Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01215 ATGAAAGCTATGGAGTTGGTGGGAGAGAAATGGATAGAAATTGTGACGTGTTTGGTAATTTCAACAACATTAATGCGGAGTGTAAGTGGAAGTGAAAGCGAGTGCATTTTCCCAGCGATATTCAACTTGGGAGACTCGAATTCAGACACTGGCGGTCTCTCAGCAGCGTTCGGACAAGCTCCTCCCCCCAACGGAATCACTTATTTCCACTCCCCTAACGGACGCTTCTCCGATGGTCGTCTCATAATCGATTTTATAGCCGAGAGCTCCGGGTTGGCATATCTGAGGGCTTACTTGGACTCGGTGGCCTCCAACTTCACTCATGGAGCCAATTTCGCAACGGCCGGATCTACTGTCAGACCTCAGAACACAACCATATCTCAGAGCGGATACAGTCCCATTTCCCTAGACGTTCAGTTCGTGCAGTTCTCTGATTTCAAAACCAGATCCAAACTCGTTCGCCAACAAGGAGGGGTTTTTAAGGAATTGTTGCCAAAGGAGGAGTATTTTTCTCAGGCTTTATATACCTTTGATATTGGCCAAAATGATCTCACTGCTGGCTACAAACTCAACTTCACCACAGAACAAGTCAAGGCATATATACCAGATGTATTGGGCCAGTTCTCCAATGTCATAAAGGGTGTGTATGGGGAAGGTGGAAGGTCGTTTTGGATACACAACACAGGACCATTGGGGTGCCTGCCATACATGCTGGATCGCTATCCCATGAAACCAACTCAAATGGATGAGTTTGGGTGTGCCAAACCATTCAACGAGGTTGCCCAATATTTTAACCGTAAATTAAAAGAAGTTGTTGAGCAACTGCGGAAAGAATTGCCAGGAGCTGCAATCACCTATGTTGATGTGTATACGGTCAAGTACACCCTCATCAGCCATGCCCAAAAATATGGTTTTGAGCAGGGGGTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAATAATACAGAGAGATGTGGAGCAACCAAGAGGGTGAATGGAACAGAGATTGTGATAGCCAATTCATGCAAAGATCCAAGTGTGAGGATTATTTGGGACGGAATCCATTACACCGAAGCTGCTAATAAATGGATCTTCCAACAAATAGTCAATGGTTCCTTTTCAGATCCACCTCACTCTTTAAAAAGGGCTTGTTATGGTAAATCCATTAGGAGACATAAATTCCAGTTATTGTAA 1200 0.4483 MKAMELVGEKWIEIVTCLVISTTLMRSVSGSESECIFPAIFNLGDSNSDTGGLSAAFGQAPPPNGITYFHSPNGRFSDGRLIIDFIAESSGLAYLRAYLDSVASNFTHGANFATAGSTVRPQNTTISQSGYSPISLDVQFVQFSDFKTRSKLVRQQGGVFKELLPKEEYFSQALYTFDIGQNDLTAGYKLNFTTEQVKAYIPDVLGQFSNVIKGVYGEGGRSFWIHNTGPLGCLPYMLDRYPMKPTQMDEFGCAKPFNEVAQYFNRKLKEVVEQLRKELPGAAITYVDVYTVKYTLISHAQKYGFEQGVIACCGHGGKYNFNNTERCGATKRVNGTEIVIANSCKDPSVRIIWDGIHYTEAANKWIFQQIVNGSFSDPPHSLKRACYGKSIRRHKFQLL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01215 399 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 387 - -
Gma08g01215 399 PANTHER BNAA06G32900D PROTEIN 22 387 - -
Gma08g01215 399 SUPERFAMILY SGNH hydrolase 111 371 - -
Gma08g01215 399 CDD SGNH_plant_lipase_like 38 374 IPR035669 -
Gma08g01215 399 Pfam GDSL-like Lipase/Acylhydrolase 40 370 IPR001087 GO:0016788
Gma08g01215 399 Gene3D SGNH hydrolase 27 374 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01215 Gma-Chr8 10316875 10319147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01215 38 377 Acyl Lipid Metabolism Gene Families AT4G10950 28.732 1.52e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01215 - - gmx:100803899 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01215 08 10316875 10319147 Gma08g01215 08 10316875 10319147 ECH