Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01199 ATGGATCCCTCTACTTCTCGTCCAGCTGTAGTCATCGATAATGGCTCCGGGTATACTAAGATGGGGTTTGCTGGTAATGTTGAGCCATGTTTTATTGTTCCCACAGTGGTTGCAATTAACGAGTCTTTTCTTAATCAATCGAGGAACTCCTCTAAAGGCAATTGGGTTGCCCAGCATAATGCTGGCGTAATGGCAGATCTTGATTTCTTCATTGGGGATGAGGCACTTTCCAAGTCTCGATCTAGCAGCACTTATAATCTCAACTACCCAATTCAGCATGGCCAGGTTGAGAATTGGGACGCCATGGAGCGCTTCTGGCAGCAGTGCATATTCAACTATTTGAGGTGTGATCCGGAGGATCACTATTTTCTCTTGACTGAGAGTCCGTTGACTTCGCCTGAGAGTCGCGAGTATACTGGGGAAATCATGTTTGAGACTTTTAACGTACCTGGGCTTTACATTGGTGTGAATTCTGTGCTTGCTCTTGCAGCTGGTTACACAACATCTAAGTGCGAGATGACAGGAGTTGTAGTCGATGTTGGAGATGGGGCTGCTCATGTTGTACCCGTTGCGGACGGCTATGTTATTGGTAGTAGCATCAAATCAATTCCTATTTCTGGAAAGGATATTACTCTTTTTGTACAGCAGCTTATGCGGGAAAGAGGAGAGAATGTACCACTAGAGGACTCTTTTGAAGTGGCACGGAAAGTGAAGGAAATGTATTGCTACACCTGCTCTGACATTGTGAAGGAATTTAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCATTGGAGAGGCATTAAACCAAGGACAGGGGCACCATATTCCTGTGATATTGGCTATGAACGATTTCTAGGCCCTGAGATTTTCTTTAATCCCGAGATATATGGCAGTGACTTTACCACCCCTTTGCCAGTTGTAATAGACAAGTGTATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATACAAGAATGTAGTGTTGTCTGGAGGTTCAACCATGTTCAAGGATTTTCACAGGAGGTTGCAACGTGATCTAAAAAAAATAGTGGATGCTCGTGTACTTTTATCTGAATCACGCTTGAATGGGGAGATAAAATCGCAGCCAGTGGAGGTAAATGTACTCAGCAATCCAATCCAGAGATTTGCAGTTTGGTTTGGAGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATATGAGGAGTATGGAGCAAGCATTTGCCGGACAAATCCTGTTTTCAAGGGAATGTATTAA 1287 0.4359 MDPSTSRPAVVIDNGSGYTKMGFAGNVEPCFIVPTVVAINESFLNQSRNSSKGNWVAQHNAGVMADLDFFIGDEALSKSRSSSTYNLNYPIQHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTSPESREYTGEIMFETFNVPGLYIGVNSVLALAAGYTTSKCEMTGVVVDVGDGAAHVVPVADGYVIGSSIKSIPISGKDITLFVQQLMRERGENVPLEDSFEVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKHWRGIKPRTGAPYSCDIGYERFLGPEIFFNPEIYGSDFTTPLPVVIDKCIQSAPIDTRRSLYKNVVLSGGSTMFKDFHRRLQRDLKKIVDARVLLSESRLNGEIKSQPVEVNVLSNPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01199 428 SMART actin_3 7 423 IPR004000 -
Gma08g01199 428 Gene3D - 158 386 - -
Gma08g01199 428 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 7 421 - -
Gma08g01199 428 SUPERFAMILY Actin-like ATPase domain 173 423 IPR043129 -
Gma08g01199 428 Pfam Actin 7 419 IPR004000 -
Gma08g01199 428 SUPERFAMILY Actin-like ATPase domain 7 177 IPR043129 -
Gma08g01199 428 PANTHER ACTIN 7 421 IPR004000 -
Gma08g01199 428 Gene3D - 10 414 - -
Gma08g01199 428 Gene3D Actin; Chain A, domain 4 205 303 - -
Gma08g01199 428 CDD NBD_sugar-kinase_HSP70_actin 10 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01199 Gma-Chr8 10225881 10230810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01199 9 418 Miscellaneous Gene Families AT2G42100 34.390 2.98e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01199 K18584 - gmx:100780462 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01199 08 10225881 10230810 Gma08g01199 08 10225881 10230810 ECH