Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00943 ATGGCCGTTTTGGATGCTCTGTTGGGAACGGTCAATGTGGCATTCTTGTATGCCATTTTGATATGGCTTTTGGTGGATAGTTTGAGACAAAGCACTCGTAATAACCATGCTCGTGTTGTACTGCATTATTTCAAACGAGGAGGACCAATGGTTTTCGCTGTATTCACTGTTCTATCCTGTGCTGTTATTTCTGTTATGAACATTGCTCTTGCCTTTTACCAATACAGCTCTAGGAGAATAATCGGATTTAACTCTGTTTCCTTGGTTCTAACTTGGGTTTTGGCCACTATAGTTTCGTTTTATTCAATGAGGACTAAAGTGAGGGAGAACAAGAGGTTCAGGTTCCCTCTTGTTCTGATCCTATGGTGGTTTTTTGCTTGTATCATAGATGCACTATTGCTGTCTTCAAAGCTGGTAAAAAAATTTGAATCAATCAACTTGTGGTTTTTCTTGTCAAAGGATAACGTAGTAGATTCGGTTTCTTTGCCTTTGTTGGTACTTCTTTGTTTCAATGTGTGTGCAAGGGAAAACAGTGATTTGGAACAAGAACAGATGTTACTTCAAAAAGAGGAGGAATCTTCTATGGAGGAAGAAGACGAACAGGCCTTTACAAATGCAAGCATGTGGAGCAAACTTGCATTTCGATGGTTGAATCCCATTTTTAAAACGGGTCGGATTCAAAAACTTGAACTTGGTCACATTCCTCCTGTTCCTCCTTCTGAAACGGCAGAAAATGCTTCTTCAGTGTTGGAAGAATCACTTCGCAAACAGAAACTTAAAGGAGGTTCCTTGACAAAAGCTATTGCCTATTCTATATGGAAGTCCTTGGCCTTAAACGCAGTTTTAGCTGGTGTTAACACAGGTGCCTCTTATATAGGTCCCTTGTTGATAACAAATTTTGTGAATTTTTTACTGGGGGATAATGGTGATTCAAGCATCCAATATGGATTGGTTCTTGCATTTATTTTTTTCCTTGCAAAGACTGCGGAGTCACTGAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATTGGAATCCGGGTGCGTGCGGCTCTTACATCTCTAATTTATAGCAAGTCCCTATTGATGAAGTGTGCTGGACCAACACAAGGTAAAATCATCAATTTGATTAATGTGGATGTTGAAAGAATTGGGGACTTCTGCTGGTACATTCACGGAGTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGGTAATCTTATACATAAATCTGGGTGGTACTCCTTCTTTTGCTGCATTTGGTGTCACCATATTGGTCATGGTGTGTAACACACCTTTGGCCAATAAGCAAGAAGGTTTGCACTCCAAGATTATGGAAGCTAAGGATTCAAGAATTAAAGTGACATCAGAGACCATGAAGAACATTAGAATTCTAAAATTGCATTCATGGGAAACTTCATTCTTGCAGAAACTCCTCCAACTTAGGGAAACTGAGAGGAGGTGGCTGCAGAAATACCTCTATACATGCTCAGCAGTAGCCACACTATTCTGGACATCTCCAACTTTAGTTTCTGTTGTCACCTTTGGTGCTTGTATACTGGTGAAAACAGAACTGACGACAGCTACAGTACTCTCAGCTTTAGCGACTTTTCGTATTCTGCAGGAACCAATCTACAACTTACCGGAGCTTATCTCCATGATCATTCAAACAAAAGTCTCCGTTGATCGAATCCAGGAGTTCATTAAGGAAGACGATCAAAACCAATTCATAAACAGGCATAGTTCAAAGATTTCAGCAGTTGCTATTGAAATTAAGCCGGGCGAATATGTATGGGAAACAAATGATCAAACCCACAAGAATCCAACAATTCAAATTACAGGAAAGTTAGTGATAAAGAAAGGTCAgaaggtagcaatttgtgggtcagtggggtccggtaaatcaagtttgatatgctgtttgcttggggagattccattagtttctggggcagtaaccaaagtctatgggactagaagttatgtgccccaaagtccatggattcagtctggaactgtaagagagaatatattgtttggcaagcaaatgaagaaggacttttatgaagatgttttggatggctgtgctttgcaccaagacatcaacatgtggggtgatggagatttgaacccggtggaggagaggggcataaacttgagtggtgggcagaaacagcggattcaattggcaagggctgtttacaatgattctgatatttatttccttgatgatccttttagtgctgttgatgctcataccggaactcatttgtttaagAAATGTCTCATGAAACTTTTATATGATAAAACGGTTGTTTATGCTACCCATCAACTGGAATTCTTGGAAGCTGCAGACCTCATTTTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGCTATAAAGATCTTATAGCATGTCCCAACTCTGAACTTGTTCAACAAATGGCTGCTTATCAAGAAACATTACACCAAATAAATCCATGCCAAGAAGATGATTCTGCTAGCTGCAGACCCTGCCAAAAAAATCAAATTGAAGTTGCTGAAGAAAATATTCAAGAGATCATGGAGGATTGGGGAAGAAGTAaagaagaggaagcagagacgggtagagtgaaatggagtgtttactcaacttttgtcatatctgcttataaaggagtgcttgttcccgttattcttctctgccaaattctctttcaagttatgcagatgggaagcaattattggatttcatgggctacAGAGCAGAAAGGCAGGGTCAACAACAAACAGCTTATGGGAACATTTGCTCTTCTATCTTTTGGTGGCACCATCTTCATACTGGGAAGGACTGTTTTAATGGCAGCTGTTGCTGTGGAAACTGCTCAACGCCTTTTTCTTGGAATGATCACATCAGTTTTCAGGGCACCTGTTTCATTTTTTGACACCACACCTTCAAGCCGAATTATGAGTAGGtcatcaacggatcaaagtactgtagacacagacataccatacagattagctggactagtgtttgcacttatccagttattgagtatcattgtgctaatgtctcaagttgcatggcaagtcattctcctcttttttgtggtgtttgcaatttccatttggtatcagGCTtattacatcacaacagccagggaattagccaggatggttgggattcgaaaggcaccaatcttgcatcacttctcagaatcaattgccggggctgctacaatccgctgtttcaatcaagagaaactattcatgaccaagattaaggctctaattgacgattattctcgggtagcctttcacaattttggcaccatggaatggctgtctgtccgAATCAATTTCCTCTTCAATTTGGTCTTCTATTTTGTACTTGTCATCTTGGTTACTCTTCCAAGGTCTACCATTGATCCAAgcttggcgggtttggtagctacttatggtttgaacttgaatgtccttcaggcttgggtgatatggaatctttgcaatgttgagaacaaaatgatatcagttgagagaatattgcagtTCTCTAGCATACCAAGTGAAGCGCCATTAATTATTCAAGATTGCAGACCTGAACCAGAGTGGCCAAAGGAGGGAAAAGTTGAACTACGTAACCTTCATATACGGTATGACCCTGCTGCTCCTATGGTCCTCAAAGGTGTCACTTGTGTCTTCCCCGCACAAAAgaaaattggtgtagtaggcaggacagggagtggaaaatctactctggtgcaagccctctttcgagtggtggagcctttggaaggatgtatacttattgatggtgtagatatttccaagattggtctgcaagatttaagatctaagcttggtataattcctcaggatccaaccttgtttctaggtactgtaaggactaacttggatccactagaacaacatgctgatcaagaactttgggagGTTCTCAGCAAGTGCCATCTTGCTGAAATAGTGAGGCGGGATCCAAGACTTCTTGATGCACCAGtggccgagaatggagagaattggagtgttggacaaaggcagcttgtatgccttgctaggttactactgaagaaaagaagaattttggtcctagatgaggcaactgcatcaattgacactgccactgacaatttaattcagaagacaattagggaagaaacaaatggatgtacagttattacagtagcgcatagaattcctacagttattgataatgatcgggttttggtccttgatgaagGGACAATTGTAGAGTATGATGAACCAGCTCAATTGCTGCAGAACAATTCTTCTTCATTCTCAAAGTTAGTCTCAGAATTTTTGAGGAGATCATCCCAAAGTAGCTTCCAGAAAAGATAG 4365 0.2605 MAVLDALLGTVNVAFLYAILIWLLVDSLRQSTRNNHARVVLHYFKRGGPMVFAVFTVLSCAVISVMNIALAFYQYSSRRIIGFNSVSLVLTWVLATIVSFYSMRTKVRENKRFRFPLVLILWWFFACIIDALLLSSKLVKKFESINLWFFLSKDNVVDSVSLPLLVLLCFNVCARENSDLEQEQMLLQKEEESSMEEEDEQAFTNASMWSKLAFRWLNPIFKTGRIQKLELGHIPPVPPSETAENASSVLEESLRKQKLKGGSLTKAIAYSIWKSLALNAVLAGVNTGASYIGPLLITNFVNFLLGDNGDSSIQYGLVLAFIFFLAKTAESLSQRQWYFGAQRIGIRVRAALTSLIYSKSLLMKCAGPTQGKIINLINVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGGTPSFAAFGVTILVMVCNTPLANKQEGLHSKIMEAKDSRIKVTSETMKNIRILKLHSWETSFLQKLLQLRETERRWLQKYLYTCSAVATLFWTSPTLVSVVTFGACILVKTELTTATVLSALATFRILQEPIYNLPELISMIIQTKVSVDRIQEFIKEDDQNQFINRHSSKISAVAIEIKPGEYVWETNDQTHKNPTIQITGKLVIKKGQKVAICGSVGSGKSSLICCLLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMKKDFYEDVLDGCALHQDINMWGDGDLNPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVESGSYKDLIACPNSELVQQMAAYQETLHQINPCQEDDSASCRPCQKNQIEVAEENIQEIMEDWGRSKEEEAETGRVKWSVYSTFVISAYKGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVNNKQLMGTFALLSFGGTIFILGRTVLMAAVAVETAQRLFLGMITSVFRAPVSFFDTTPSSRIMSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKLFMTKIKALIDDYSRVAFHNFGTMEWLSVRINFLFNLVFYFVLVILVTLPRSTIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPKEGKVELRNLHIRYDPAAPMVLKGVTCVFPAQKKIGVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVDISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADQELWEVLSKCHLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETNGCTVITVAHRIPTVIDNDRVLVLDEGTIVEYDEPAQLLQNNSSSFSKLVSEFLRRSSQSSFQKR 1454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00943 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 893 1169 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g00943 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1432 IPR027417 -
Gma08g00943 1454 SUPERFAMILY ABC transporter transmembrane region 271 570 IPR036640 GO:0005524|GO:0016021
Gma08g00943 1454 Gene3D ABC transporter type 1, transmembrane domain 858 1187 IPR036640 GO:0005524|GO:0016021
Gma08g00943 1454 SMART AAA_5 1232 1423 IPR003593 -
Gma08g00943 1454 SMART AAA_5 621 795 IPR003593 -
Gma08g00943 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 277 557 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g00943 1454 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 116 1449 - -
Gma08g00943 1454 CDD ABCC_MRP_domain1 590 795 - -
Gma08g00943 1454 Gene3D - 1189 1442 IPR027417 -
Gma08g00943 1454 CDD ABC_6TM_ABCC_D2 891 1181 IPR044726 GO:0140359
Gma08g00943 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 592 818 IPR003439 GO:0005524
Gma08g00943 1454 Coils Coil 839 859 - -
Gma08g00943 1454 Pfam ABC transporter 617 747 IPR003439 GO:0005524
Gma08g00943 1454 Pfam ABC transporter 1223 1371 IPR003439 GO:0005524
Gma08g00943 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 808 IPR027417 -
Gma08g00943 1454 Coils Coil 180 200 - -
Gma08g00943 1454 Pfam ABC transporter transmembrane region 278 544 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g00943 1454 Pfam ABC transporter transmembrane region 895 1133 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g00943 1454 SUPERFAMILY ABC transporter transmembrane region 893 1186 IPR036640 GO:0005524|GO:0016021
Gma08g00943 1454 ProSitePatterns ABC transporters family signature. 720 734 IPR017871 GO:0005524
Gma08g00943 1454 CDD ABCC_MRP_domain2 1204 1424 - -
Gma08g00943 1454 CDD ABC_6TM_ABCC_D1 278 565 IPR044746 GO:0140359
Gma08g00943 1454 PANTHER OS01G0902100 PROTEIN 116 1449 - -
Gma08g00943 1454 Gene3D - 569 837 IPR027417 -
Gma08g00943 1454 Gene3D ABC transporter type 1, transmembrane domain 265 568 IPR036640 GO:0005524|GO:0016021
Gma08g00943 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1206 1440 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00943 Gma-Chr8 7955356 7961488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00943 609 840 Calmodulin-binding Proteins AT2G36910 29.032 1.94e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00943 - - gmx:100809063 2787.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00943 08 7955356 7961488 Gma08g00943 08 7955356 7961488 ECH
Gma05g01462 05 36434255 36440314 Gma08g00943 08 7955356 7961488 GST