Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00848 ATGTTGACTTCAGCATCCTCATCATCCTCCATCTTCTCCTTCACCCCTAAAACCCTAACCATACCCCCACAGCAACCTCGCTTCACCGTCCGGGCCCACTCCAAACCCCCCATTCTCCCCAACCTCAAAACCCTCGCCGGCGCCGCGGTCTTCGCCGCCGTCGCGCTCCAATTCCCCTCCACCGCACGTGCCTCCCCTCCGCCTCCTCTCGAAACCGACCACCGCCTCAACGTCGAGGAGTCCCTCTCCCCTCTCTCCGACCTCCTCGAAACCAACGCCGAGGCCCTCGCCGCGCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGACGAGGCGCTCGCCATCCTCAAGCGCCTCATCGCCGCGCAGCCCGACGCCGCCGACTGGAAGTTCCTCGCGGCGCGCCTCACCGCGGAGACAGGCGACTCGGACTCCGCGCGCGGCTACTACGAGGAGGTCCTCGCCGCGAACCCGCTCTCTTTCGAGGCGCTCTTCGAGAACGCGCTGCTGATGGACCGGTGCGGCGAGGGGGAGGCCGCGATGCGGCGCCTCGAGGAGGCGCTGCGAGTGGCGGAGGAGGACAAGATGGCGAAGGAGGCCAGAGACGTAAAGCTCATCATGGCGCAGATCATGTTTCTTCAGAAAAACGTGGATGAAGCGTTAGTAATTTATAATCAGCTCACGAAAGAGGATCCTAGGGATTTCAGGCCTTATTTTTGTAGAGGCATGATTTATAGCTTGCTTGATAGGAATGAAGAAGCTAAGGAGCAGTTTGCAAAATACAGGGAATTGAGTCCAAAGAAGTTTGAGGTTGATGGTGTGGCACTGCGTTGGACTCGTTTGGCACCGTCACGCGTTCCTTGTTCGAATTTGAACTTCTGTGTGGTGCCTAGTAGTAGTAGCAGCAGCAGCTGA 924 0.5942 MLTSASSSSSIFSFTPKTLTIPPQQPRFTVRAHSKPPILPNLKTLAGAAVFAAVALQFPSTARASPPPPLETDHRLNVEESLSPLSDLLETNAEALAALKSLLQQKLELGEDDEALAILKRLIAAQPDAADWKFLAARLTAETGDSDSARGYYEEVLAANPLSFEALFENALLMDRCGEGEAAMRRLEEALRVAEEDKMAKEARDVKLIMAQIMFLQKNVDEALVIYNQLTKEDPRDFRPYFCRGMIYSLLDRNEEAKEQFAKYRELSPKKFEVDGVALRWTRLAPSRVPCSNLNFCVVPSSSSSSS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00848 307 Coils Coil 177 204 - -
Gma08g00848 307 Coils Coil 85 105 - -
Gma08g00848 307 SUPERFAMILY TPR-like 94 270 IPR011990 GO:0005515
Gma08g00848 307 Pfam Tetratricopeptide repeat 241 270 IPR019734 GO:0005515
Gma08g00848 307 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 72 277 - -
Gma08g00848 307 Gene3D Tetratricopeptide repeat domain 207 275 IPR011990 GO:0005515
Gma08g00848 307 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 72 277 - -
Gma08g00848 307 Gene3D Tetratricopeptide repeat domain 70 206 IPR011990 GO:0005515
Gma08g00848 307 Pfam Tetratricopeptide repeat 208 236 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00848 Gma-Chr8 6943149 6946410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00848 - - gmx:100780000 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00848 08 6943149 6946410 Gma08g00848 08 6943149 6946410 ECH