Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00668 ATGGCTTCCAATATTCATGATGAATCTGTTTCATCAGCTCCAACACGTGCTTATGAAACTAAACCCAGTTCAAAATCAATACCCCAGCAAAGTGTCATAGACATTGAAGCCACCACACTAGAAATGGAAGCTTTTAGAGGCCCAAGAAAGATCAATGGATCAGCTGGTGAGACTCAGAAAGAAGAGATTGGTATCTGCTTGACATGGAAGGATGTATGGGTGACTGCTTCCAATAGAAAGAGTGGAAGCAAATCAATTCTTCACGGGCTAACTGGTTATGCTAAGCCAGGGCAACTCTTGGCAATAATGGGTCCCTCTGGCTGTGGCAAATCTACTCTACTTGATTCTTTAGCAGGGAGATTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGTCACAAACAAGCACTGTGTTATGGAACCTCAGCATATGTCACACAAGATGATACATTACTCACCACCTTAACGGTTAGAGAAGCAGTGCACTATTCAGCTCAGCTCCAATTACCTGACACCATGTCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTTGTAAAGGCATAAGTGGGGGTCAGAAGAGGAGAGTTAGCATCTGCATAGAGATCCTAACACGCCCAAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATCGCTGCCCTTGCTCAAAATGACCACATTCAGAGAACTGTTATTGCGTCAATCCACCAGCCTAGTAGTGAAGTTTTTCAACTCTTCCATAGCCTTTGTCTTCTGTCTTCGGGTAAAACAGTTTATTTTGGACCTGCTTCTGCTGCAAAGGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGATATTGAAGCGGGTTTAGCAGGAACTGAAAACATACTCACAGAAGAAGTAATCCACATCCTTGTGAACTCATACAAATCATCTGAAAGGAATCAAGAAGTTCAAAATGAAGTAGCTTTACTATCTAAGAAGGACACCAGTTCATTGGATATGAAGAAAGGGAATGCAGGCTTCCTTAATCAATGCTTAGTTCTAACCAAAAGATCGTTCATTAACATGTATCGTGATCTAGGCTATTATTGGTTACGCCTTGTCATATATATTGCATTGGCCATAACTTTAGCCACTGTTTTCTATGATTTGGGAACAAGTTATGACTCAATTAAGGATCGAGGTTCACTTGTTGCTTTCATAAATGGATTCATTACTTTCATGACCATTGGTGGATTTCCTTCCTTTGTGGAAGTCATGAAGGTATATCAACGAGAAAGACAAAATGGGCATTATGGTGTGACTGCATTTGTCATTGGGAACACCTTGTCATCAATCCCATACTTGCTAATGGTTACATTCATTCCTGGGGCTATATCTTATTACCTTCCCGGTCTTCAGAATGGATGCGAACATTTTCTGTATTTCATTTGTGTTTTATTTTCAAGTCTCATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGTGTGGTTCCCAACTATCTTATGGGCATCATTGCTGGTTCTGGAATTCAAGGAATCATGCTTTTACTTAGTGGGTTCTTTAAATTGCCAAATGATATTCCTAAGCCAGTTTGGAAGTACCCATTACACTATGTTGCTTTTCATACGTATGCCAACCAAGGAATGTTCAAGAACGAATATAAAGGACTAAGATTTAATACAGATCATCAAGTTGGATCAGGAGGCTCACATGGTTACATAAGTGGTGAAGAGGTTTTAAGAAATACATGGCAAGTTGACACGAGTTACTCAAAGTGGGTTGATCTAGCAATCTTGATTGGAATGATTGTTGTATATCGAGTTTTGTTTTTGGTTATCATCAAGATTAAAGAGAAGATGAAGCCCCTTGTTGTATCATTATCGTGCATGTCAGCCTCTCCCAAGAGAACAATGCAGGTCATGGAAAACCCCAACGCCACTCCTTTACATTGA 2100 0.4 MASNIHDESVSSAPTRAYETKPSSKSIPQQSVIDIEATTLEMEAFRGPRKINGSAGETQKEEIGICLTWKDVWVTASNRKSGSKSILHGLTGYAKPGQLLAIMGPSGCGKSTLLDSLAGRLGSNTRQTGEILINGHKQALCYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIAALAQNDHIQRTVIASIHQPSSEVFQLFHSLCLLSSGKTVYFGPASAAKEFFASNGFPCPPLMNPSDHLLKTINKDFDQDIEAGLAGTENILTEEVIHILVNSYKSSERNQEVQNEVALLSKKDTSSLDMKKGNAGFLNQCLVLTKRSFINMYRDLGYYWLRLVIYIALAITLATVFYDLGTSYDSIKDRGSLVAFINGFITFMTIGGFPSFVEVMKVYQRERQNGHYGVTAFVIGNTLSSIPYLLMVTFIPGAISYYLPGLQNGCEHFLYFICVLFSSLMLVESLMMIVASVVPNYLMGIIAGSGIQGIMLLLSGFFKLPNDIPKPVWKYPLHYVAFHTYANQGMFKNEYKGLRFNTDHQVGSGGSHGYISGEEVLRNTWQVDTSYSKWVDLAILIGMIVVYRVLFLVIIKIKEKMKPLVVSLSCMSASPKRTMQVMENPNATPLH 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00668 699 CDD ABCG_EPDR 64 295 - -
Gma08g00668 699 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
Gma08g00668 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 304 IPR027417 -
Gma08g00668 699 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 699 - -
Gma08g00668 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 699 - -
Gma08g00668 699 SMART AAA_5 96 285 IPR003593 -
Gma08g00668 699 Gene3D - 67 326 IPR027417 -
Gma08g00668 699 Pfam ABC transporter 88 238 IPR003439 GO:0005524
Gma08g00668 699 Pfam ABC-2 type transporter 270 375 IPR043926 GO:0140359
Gma08g00668 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 313 IPR003439 GO:0005524
Gma08g00668 699 MobiDBLite consensus disorder prediction 1 29 - -
Gma08g00668 699 Pfam ABC-2 type transporter 392 603 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00668 Gma-Chr8 5536637 5541936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00668 86 298 Calmodulin-binding Proteins AT2G36910 27.854 2.84e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00668 K05681 - gmx:100794527 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00668 08 5536637 5541936 Gma08g00668 08 5536637 5541936 ECH