Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00493 ATGCTTTCTGTGAGGGATTTTTGGAGGCGGCATAGGAGGAAGGTTTTCGTCACTGTTGGTGTTTTAGGAAGTGGGTATCTTTTGTATAAGCTCTACGGTGCTCAGAGACATGGGGTTCAGGAACTTGAAAGAGAACTCGCAGTTCAGAGGGAAACTGAGGACCTTATGAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAAGATGTCTGATGTAACATTGCCGCATGCTATGCACGAGTTAAGTTGTCGGATCACAGAAGAGTTGGATCTTTCTCACCTTCTTGAAAGGCTAATTCAAGGAAAGGGTCAGCCAAACACCTTGACTCAATCAGAGAAACTAGATCTATGGAGTAGACTCAAAATTCTGAGTTTTACAAGAATGACATTGTCAGTATGGGCTACAACAATGCTTAGCTTATATACAAAAGTTCAAGTCAATATTCTAGGAAGGCATTTATACATTGATACAGCACGTAGTCTCGGAATCTCTGATTCAGTGGAAAGTGGAGATGTGGTTGATAGGGAAGACCAAAAGAAATTTCTAGATAATATTGATTTTCTCTCTCAGCATGGTATGCCTGCCTTGATTTCTGATATGGAGGCAGCAACAAAAGAAGTTCTCAAAGGAAAGCAGTTGAGTACTTTCTTCAACAGCACAACACTTCATGAAACTATCATGCAGATACTCAACTCCTTCATGAGCATGGGGACTCCAAATTCCTGGATAAAGTATATGATACCTGAAGATGTTAGACCATATTCCACAACCTATGGTAGTGATGACCCAGTGCCATTTGACATGACTGAATTTGAACAACTTATGATGGAAGCATGGGCAGTATTATCAAGTGCTGAATTTGGAAGCATTGTAGAGATATCTCTGAAAGCAGTGGTGGATACACTGGTGGAGCTCATGGGGACTAAATTTAGTGGAGGAAGTGTAGCCGGGGGCCTGCCTCTGGCCAGAGTGTTGCCTCAAGTTGCACAGATGTGTCCTTTGCTCCTTGAAGAACCCAGAAAAAATCAGTTCATCCAAATCATTAAAAATATACAGGAGGTTGAACTTTTTTTCACACTCCTCTATGCAAATATGCCACATGCATAG 1110 0.4153 MLSVRDFWRRHRRKVFVTVGVLGSGYLLYKLYGAQRHGVQELERELAVQRETEDLMKAQMQAHFENIQKMSDVTLPHAMHELSCRITEELDLSHLLERLIQGKGQPNTLTQSEKLDLWSRLKILSFTRMTLSVWATTMLSLYTKVQVNILGRHLYIDTARSLGISDSVESGDVVDREDQKKFLDNIDFLSQHGMPALISDMEAATKEVLKGKQLSTFFNSTTLHETIMQILNSFMSMGTPNSWIKYMIPEDVRPYSTTYGSDDPVPFDMTEFEQLMMEAWAVLSSAEFGSIVEISLKAVVDTLVELMGTKFSGGSVAGGLPLARVLPQVAQMCPLLLEEPRKNQFIQIIKNIQEVELFFTLLYANMPHA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00493 369 Pfam Peroxin-3 7 109 IPR006966 GO:0005779|GO:0007031
Gma08g00493 369 Pfam Peroxin-3 106 365 IPR006966 GO:0005779|GO:0007031
Gma08g00493 369 Coils Coil 39 59 - -
Gma08g00493 369 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 367 - -
Gma08g00493 369 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 367 IPR006966 GO:0005779|GO:0007031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00493 Gma-Chr8 4089665 4094331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00493 K13336 - gmx:100778748 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00493 08 4089665 4094331 Gma08g00493 08 4089665 4094331 ECH
Gma05g02363 05 44501761 44507750 Gma08g00493 08 4089665 4094331 GST