Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00485 ATGGATAGAGAAGATCAAAAGGCATCTCTACTGTCTCAATTGATACATATCACAGTGGAAGATAGACTCAAAGTTGATAACATACAGCGCAACAAGGATAAGCAGCAGGCAATAGAGAGAGCTGAACTGTATGAAGAAGTGAGGAAGCAGTTATGGCTAGCAGGGCCTTTAATATCTGTTTCTATGTTAAATTATTCCCAACAAATTATATCTGTTATGTTTGTGGGGCATCTCGGCCAATTGCCTCTCTCTGGTGCTTCAATGGCTACTTCTTTTGCCTCTGTCACTGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCTTTGGATACTTTGTGTGGGCAATCATATGGAGCAAAGCAGCACCATATGTTAGGCATACACATGCAGAGGGCTATGCTTGTTCTTATGATTGTCAGCATAAACCTTGCATTTATTTGGGCAAATACAAGATCCATTCTGGTTGCCCTTGGTCAAGACCCTGAAATATCTGCAGAAGCTGGACAATATGCTCAGCTAATGATTCCAAGCCTCTTTGCCTATGGCATTCTTCAGTGCCTTAACAGATTTTTGCAAACCCAAAATATTGTATTTCCAATGGTGTTCAGCTCTGGAGTCACTACTTTACTGCATATTCTTATATGTTGGACTATGGTATTCAAATCTGGACTTGGAAACAAAGGAGCTGCCATAGCAAATGCTATATCTTACTGGATAAATGTTTTAATCCTCATACTCTATGTCAAGTTTTCTCCCTCGTGCTCAAAAACTTGGACTGGATTTTCTAAAGAGGCATTGCATGGCATCCCTTCTTTTCTTAAACTTGCAATTCCTTCTGCTCTTATGGTTTGCTTGGAAATGTGGTCGTTTGAAATGATGGTACTCCTCTCTGGCCTTCTTCCAAATCCAAAATTAGAAACATCAGTGCTTTCTATCTGTCTGAATACTTCGACAAGTGTTTGGATGATCCCCTTTGGACTCAGTGGAGCTGTAAGCACTCGTGTCTCAAACGAACTAGGAGCTGGTCATCCACGGGCTGCGCGTTTAGCAGTGTATTTTGTCTTTATAATGGCCATTATTGAGGGAACTTTTGTTGGAGCAGTGATGATAATAATACGCAACATTTGGGGCTATGCATATAGTAATGAAGCGGAAGTAGTCCAATATGTAGCTATCATGTTGCCAATTCTTGCAACATCCATTTTCCTTGATGCACTCCAGTGTGTTCTTTCAGGAACAGCTAGAGGATGTGGTTGGCAAAAAAAGGGTGCTTTCATTAATCTAGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTTGTTTGCTTTCGTCCTGCACATTGGTGGGAAGGGGCTTTGGCTGGGGATCATATGTGCTCTAGTTGTTCAAGTGTCATGTCTTCTGATCATTACAATACGTACTGATTGGGAACAAGAGGCAAAGAAGGTGAAAGACAGAGTCTACGATTCTATGAGAGCTGAGGTCATAGTCTCGTGA 1497 0.4128 MDREDQKASLLSQLIHITVEDRLKVDNIQRNKDKQQAIERAELYEEVRKQLWLAGPLISVSMLNYSQQIISVMFVGHLGQLPLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHHMLGIHMQRAMLVLMIVSINLAFIWANTRSILVALGQDPEISAEAGQYAQLMIPSLFAYGILQCLNRFLQTQNIVFPMVFSSGVTTLLHILICWTMVFKSGLGNKGAAIANAISYWINVLILILYVKFSPSCSKTWTGFSKEALHGIPSFLKLAIPSALMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTSTSVWMIPFGLSGAVSTRVSNELGAGHPRAARLAVYFVFIMAIIEGTFVGAVMIIIRNIWGYAYSNEAEVVQYVAIMLPILATSIFLDALQCVLSGTARGCGWQKKGAFINLGSYYLVGIPSAILFAFVLHIGGKGLWLGIICALVVQVSCLLIITIRTDWEQEAKKVKDRVYDSMRAEVIVS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00485 498 PANTHER PROTEIN DETOXIFICATION 27 486 - -
Gma08g00485 498 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 486 - -
Gma08g00485 498 TIGRFAM matE: MATE efflux family protein 56 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma08g00485 498 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Gma08g00485 498 Pfam MatE 56 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma08g00485 498 Pfam MatE 277 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00485 Gma-Chr8 4039039 4041925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00485 K03327 - gmx:100792588 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00485 08 4039039 4041925 Gma08g00485 08 4039039 4041925 ECH