Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00401 ATGAGATTAAGCATGAAAAGTGCTTTACTATCAACACTCCCACCCTCTTCATCAGTTCTCTTATTCTCCTCCTACTCTAAATTCAAACTCAAATCCCCACTCGGAATTCCCATTCGCGCTCTCACCTCCTCTTCTCTCCCAACCACCCGCGACCACGATGATTTATTCGACCCTCTTTCCCTTCCCGCTCCCCAACACCTTCACAAAGCCACCAACGCCATCGAGAGAATCGCCCTCCGCTTGCGCAACTTAGGGTTAGCTTCCACCACCGACCTTGCCGACGCCGAAGACGATTTCCTGCGCCGCGAATGGCTTCGCCCCGACCAGGCGCTTTTTCCGTGGGACAAGGGACAAGAAGAAGACGCAGAGGAGCCCGGGGAACAGCAAAAGGAGATGCTAAAGAAGAAGAACGTTAATGCGTCGACATTGGCGGAGCAAACGCTGGTGGAGGAGGAGCTGCGGCGATTGCGAACCCTTGGAATGAGTCTTAAGGAAAAGATCACTATTCCCAAAGCTGGCCTCACGCGAGCCGTGCTCGACAGGATTCACCGTCACTGGAGCAACTGCGAGCTGGTGAGGCTCAAGTTTCACGAGTTTCTTGCTCAGAACATGAAGTTGGCTCATCAAATTGTCGAGCATAGAACTAGAGGGTTAGTTATATGGAGGTCGGGGAGTTATATGTGGGTTTACCGTGGTAAGAATTATCAAGGGCCGGTGGAGAGTGATGCAACATCAATGGAAAAGAGTGAGGCAGTTTGGTGGAAGGGGGAGAACATGACGCCAGAGGAAGCAGAATTCAACAGGATGCTGGATGGCTTTGGTCCTCGATTTGTTGAATGGTGGGGTACTGGAATACTTCCCGTTGATGCTGATTCACTTCCCCCTATGGTTCCTGGTTACAAAACGCCTCTTAGGCTTCTTCCTGCCGGAATGCGTCCGCAACTGACCAATGATGAACTCACGAATATGCGGAAGCTTGCTAAATCTCTTCCTTGTCACTTTGCCTTGGGGAGAAATAGAAATCTTCAAGGTCTGGCATCTGCTATTCTTAGGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGGTGTCAAGCGTGGTATTGTGAATACAAACAATGAACTGATGGCTCAGGAACTGAAGGCATTAACAGGAGGTACCTTACTGCTAAGGAATAAATATTACATTGTAATATATCGTGGGAAGGACTTTGTTCCAACCAGTGTGGCTGCTGTTATTGCTGAAAGACAGGAATTGACAAAACAGGTGcaggatgttgaggagaaggtgcggtgcaaagctctcgactcaactccatccggggaagatgaatcaacagcacaagcAGGATCGTTGGCAGAGTTCTACGTGGCACAGGCATGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAGGATGATGCAAGAGGTTGCCAAAGCCAAAAATGCTAAGCTTGTCAAAAAAATTGAATGTAAACTAGCTGTTGCCCAGGCCAAAAGGCTTAGAGCAGAAAAGCTATTAGCAAAAATAGAAGCATCTTTGCTTCCAGTTGGTCCTGATTATGACAAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGTTCAGTTGGTTTAAGAATGAAGGCATACTTGCCACTTGGTATACGTGGTGTTTTTGATGGTGTTATTGAGAATATGCATTTGCATTGGAAACATCGAGAACTTGTTAAATTAATAACAAAACAAAAGACCCTTGCTTTTGTTGAAGACACAGCTAGGTTATTGGAATATGAAAGTGGTGGAATACTAGTAGCAATAGATAAAGTTCCTAAAGGATTTTCTCTTATTTACTACCGTGGAAAGAATTATAGGCGACCTATGACATTGAGGCCTAGAAACCTTCTAACGAAGGCAAAGGCATTGCAGCGTTCAGTAGTCATGCAACGGCACGAGGCTCTGAGTCAGCATGTAACTGAATTGGGGGAAAAAATAGAAGAAATGAAAAAAAAACTTGGTTTGTCTCAGGATTTGGGGACTAAAGATAGGTGGAACGTAGAGGACCACAACCAAATAGACCATATATCAGAGTTCACCCAAAGTGAGGAGGAATACTCTGATGGAGATGACACTGACGGTAATTTCAATGACGACGAATACAGTGAGTGCAATGACAATGATTCTGAATTTTAA 2172 0.4378 MRLSMKSALLSTLPPSSSVLLFSSYSKFKLKSPLGIPIRALTSSSLPTTRDHDDLFDPLSLPAPQHLHKATNAIERIALRLRNLGLASTTDLADAEDDFLRREWLRPDQALFPWDKGQEEDAEEPGEQQKEMLKKKNVNASTLAEQTLVEEELRRLRTLGMSLKEKITIPKAGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMKLAHQIVEHRTRGLVIWRSGSYMWVYRGKNYQGPVESDATSMEKSEAVWWKGENMTPEEAEFNRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQLTNDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELMAQELKALTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVRCKALDSTPSGEDESTAQAGSLAEFYVAQACWGRDISTEERERMMQEVAKAKNAKLVKKIECKLAVAQAKRLRAEKLLAKIEASLLPVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRRPMTLRPRNLLTKAKALQRSVVMQRHEALSQHVTELGEKIEEMKKKLGLSQDLGTKDRWNVEDHNQIDHISEFTQSEEEYSDGDDTDGNFNDDEYSECNDNDSEF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00401 723 Coils Coil 463 483 - -
Gma08g00401 723 Coils Coil 644 664 - -
Gma08g00401 723 MobiDBLite consensus disorder prediction 695 723 - -
Gma08g00401 723 PANTHER (CRM) DOMAIN PROTEIN, PUTATIVE-RELATED 3 719 - -
Gma08g00401 723 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 3 719 IPR045278 GO:0000375|GO:0003729
Gma08g00401 723 ProSiteProfiles CRM domain profile. 146 242 IPR001890 GO:0003723
Gma08g00401 723 MobiDBLite consensus disorder prediction 686 723 - -
Gma08g00401 723 ProSiteProfiles CRM domain profile. 524 624 IPR001890 GO:0003723
Gma08g00401 723 SUPERFAMILY YhbY-like 148 239 IPR035920 -
Gma08g00401 723 Pfam CRS1 / YhbY (CRM) domain 527 613 IPR001890 GO:0003723
Gma08g00401 723 Pfam CRS1 / YhbY (CRM) domain 149 231 IPR001890 GO:0003723
Gma08g00401 723 Pfam CRS1 / YhbY (CRM) domain 315 399 IPR001890 GO:0003723
Gma08g00401 723 Coils Coil 408 428 - -
Gma08g00401 723 SUPERFAMILY YhbY-like 525 623 IPR035920 -
Gma08g00401 723 SMART CRS1_YhbY_2 148 231 IPR001890 GO:0003723
Gma08g00401 723 SMART CRS1_YhbY_2 315 399 IPR001890 GO:0003723
Gma08g00401 723 SMART CRS1_YhbY_2 526 613 IPR001890 GO:0003723
Gma08g00401 723 SUPERFAMILY YhbY-like 314 406 IPR035920 -
Gma08g00401 723 Gene3D - 147 243 IPR035920 -
Gma08g00401 723 Gene3D - 314 407 IPR035920 -
Gma08g00401 723 Gene3D - 525 625 IPR035920 -
Gma08g00401 723 ProSiteProfiles CRM domain profile. 313 410 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00401 Gma-Chr8 3378691 3384475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00401 - - gmx:100776626 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00401 08 3378691 3384475 Gma08g00401 08 3378691 3384475 ECH
Gma08g00401 08 3378691 3384475 Gma07g00837 07 8914664 8920928 PCT
Gma08g00401 08 3378691 3384475 Gma09g01699 09 42643664 42652879 PCT
Gma07g00837 07 8914664 8920928 Gma08g00401 08 3378691 3384475 PCT
Gma09g01699 09 42643664 42652879 Gma08g00401 08 3378691 3384475 PCT