Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00400 ATGGCCGGAAAACAGGTCGGCGAGGGTTTACCGGCGAACCTCGCTGGAATGTCAAAGAATCAGCTCTACGATATCATGTCTCAGATGAAGAATCTGATCGAACAGAACCAGCAACAGGCCAGGCAGATCCTCATCCAAAATCCTATGTTAACCAAAGCGCTTTTCCAGGCACAAATTATGCTTGGAATGGTGCAAGCACCTCAAGTGGTTCCAAAAGTTCAGCCAATGGTTTCACAGAACAATCAGCAGCCAGTACAACCAACACAACAGCCAAATATTCAGCCTGCTCCATTATTGCCTGGGCATGGTGGTGCACAGGATCAAGCAGGTGTATCTCAAACCCAAATTCCTCTGAGGAAACACCAGAACCAACCTTCAGTGCCAGTTTCATCTGCTGTTCCTGCAGCGAGGCATCAATCTCAGCCCATGGCTGCACATTCCTTGCCAATGCCACAACATCCTAAAGGACATCCAACTCCCCAAATGGCTCTAGTGTCTCTTCCACAATCATCACAACTTCCAAACATACCTCCACCTTCTCTTCAATCATCATCACAGCCTCTTCATCCAACTCAAATGGCAACTGCTTCCAGTCAGTTACAGCAACCAATGCAGACATCGGGGTTTCCACCTCTGCAACCACCGCTGCCACCGCAGATCAGACCAACTGCATTGCCAACCTTCCATCCCCAGTATCCCCCACAAATGGGTGCAAACATGGGTTTCCAACATGCTGGTGCTTCTCACAATCTTCCGCAATCGATGTTTCATCCTGGTACAAAACCTTCTGCTAGTGTTGGGTCCACATTCCCACAGGGGCAGACACCACTTCCAGGTCAACCATCATCTCAGCCACCTTATCAGGTTGGGAATATGCCTTTAGGGCCTGATTTTGGCAACCAAGCTGGAAATGCTATGCAAGTAGACAGAGGGTCTTCTTGGATGCTTGGTCCCTCAGAAAACCTAGCACATCTATCTGGTCCTCCTGGACCACCATCTGTAGTTTCTGGTCAGATGGGTGCTGCTGCTAAGCAGCCTCTTCGGCCTCCTGGGTTGACACCGGAGATGGAGAAGGCACTGCTTCAGCAGGTCATGAGCCTCACACCAGAGCAGATAAATCTCCTGCCTCCAGAACAAAGAAATCAAGTGCTGCAGCTACAACAGATGTTGCGTCAATGA 1179 0.4962 MAGKQVGEGLPANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQIMLGMVQAPQVVPKVQPMVSQNNQQPVQPTQQPNIQPAPLLPGHGGAQDQAGVSQTQIPLRKHQNQPSVPVSSAVPAARHQSQPMAAHSLPMPQHPKGHPTPQMALVSLPQSSQLPNIPPPSLQSSSQPLHPTQMATASSQLQQPMQTSGFPPLQPPLPPQIRPTALPTFHPQYPPQMGANMGFQHAGASHNLPQSMFHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVGNMPLGPDFGNQAGNAMQVDRGSSWMLGPSENLAHLSGPPGPPSVVSGQMGAAAKQPLRPPGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00400 392 MobiDBLite consensus disorder prediction 236 292 - -
Gma08g00400 392 MobiDBLite consensus disorder prediction 107 137 - -
Gma08g00400 392 Gene3D - 353 392 IPR038192 -
Gma08g00400 392 Pfam Hinge domain of cleavage stimulation factor subunit 2 12 67 IPR025742 -
Gma08g00400 392 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 392 - -
Gma08g00400 392 MobiDBLite consensus disorder prediction 185 207 - -
Gma08g00400 392 Pfam Transcription termination and cleavage factor C-terminal 358 392 IPR026896 GO:0031124
Gma08g00400 392 Gene3D - 7 72 - -
Gma08g00400 392 MobiDBLite consensus disorder prediction 246 277 - -
Gma08g00400 392 MobiDBLite consensus disorder prediction 77 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00400 Gma-Chr8 3372662 3375950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00400 - - gmx:100801770 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00400 08 3372662 3375950 Gma08g00400 08 3372662 3375950 ECH