Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00387 ATGTATGGCGGTGACGAAGTATCAGCAATAGTGATAGACCTGGGTTCCCACACTTGCAAAGCCGGTTACGCTGGCGAAGATGCTCCCAAGGCCGTCTTTCCCTCTGTTGTTGGTGCAATTGATCAAATGGACATTGATGGAACTGCTGATATTAATGATGAGAACTCTGACAAAACCAAGGGAAAATGCAAACTTTATGTAGGATCTCAGTCACTAGGATACCGCAGAGACCATATGGAGGTGCTGTCACCCTTGAAGAATGGAGTTGTTGTTGACTGGAATATTGTAGATAACATATGGGATCATGCTTTGAGGGAATGCCTCCTAGTCGACCCTAAAGAACGTCCAATGCTACTTGCCGAACCATGCTCCAACACTCAAGAACAGAGAGAAAGGGCAGCAGAACTTATGTTTGAAAAATATAAAGTACCAGCGTTGTTTTTGGCGAAGAATGCTGTTCTCACATCTTTTGCATCAGGGCGTGCTACCTCATTAGTTGTTGATAGTGGTGGTGGATCAACTACTGTTGTACCAGTACTGGATGGTTATGTTCTTCAAAAGGCTGTGATAGCTTCTCCTATTGGAGGAGAGTTTCTGACAGATTGCTTGATGAAAAGTTTGGAAGGCAAAGGTATCACAATAAGACCTCGATGTTCATTCAAGAAAAAGGAAATACATCCTGGAAATCTTCAGACTGTAGACCTTGATTTTCCACATACAACAGAAAGCTACAAACTCTACTCCCAGAGGGTGATTGCTAGTGACATCAAGGAATGTGTTTGCCGAACACCAGATTCTCCATATGATGAGAGAGTATATTCTAACATTCCTATGACTCCGTACGAGCTTCCTGATGGCCAGATTATTGAAGTTGGATCTGACAGATTCAAGATTCCTGATATTCTTTTTAATCCATTATTGGTTCAGACAATCCCTGGTATGGAGAGTTTTGCAGAAATTGCTCCTTCAATTCGTGGTCTTCCAAAAATGATTATAGAGAGCATTAATAAGTGTGATGTGGACATTCGTAGGGAACTATTTAGTACCATACTGCTTACTGGTGGTACAGCTTCAATGCACCAATTGAAGGAACGCATTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCTAGAGTAAAAGTATTTGTCAGTGGAAATGCAACTGAAAGAAGGTTCAGTGTTTGGATAGGGGGGAGTATACTGGCTTCTCTTGGCTCCTTCCAGCAGATGTGGTTCTCCAAGTCCGAGTATGAAGAGCAAGGTGCTTCTTATATCCAAAGGAAGTGCCCTTGA 1296 0.4267 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDGTADINDENSDKTKGKCKLYVGSQSLGYRRDHMEVLSPLKNGVVVDWNIVDNIWDHALRECLLVDPKERPMLLAEPCSNTQEQRERAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVVPVLDGYVLQKAVIASPIGGEFLTDCLMKSLEGKGITIRPRCSFKKKEIHPGNLQTVDLDFPHTTESYKLYSQRVIASDIKECVCRTPDSPYDERVYSNIPMTPYELPDGQIIEVGSDRFKIPDILFNPLLVQTIPGMESFAEIAPSIRGLPKMIIESINKCDVDIRRELFSTILLTGGTASMHQLKERIEKDLLEESPQAARVKVFVSGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEQGASYIQRKCP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00387 431 PRINTS Actin signature 28 37 IPR004000 -
Gma08g00387 431 PRINTS Actin signature 129 142 IPR004000 -
Gma08g00387 431 PRINTS Actin signature 154 173 IPR004000 -
Gma08g00387 431 SUPERFAMILY Actin-like ATPase domain 160 430 IPR043129 -
Gma08g00387 431 SMART actin_3 7 431 IPR004000 -
Gma08g00387 431 CDD NBD_sugar-kinase_HSP70_actin 10 195 - -
Gma08g00387 431 SUPERFAMILY Actin-like ATPase domain 5 167 IPR043129 -
Gma08g00387 431 PANTHER - 2 430 - -
Gma08g00387 431 Pfam Actin 4 430 IPR004000 -
Gma08g00387 431 Gene3D - 168 370 - -
Gma08g00387 431 PANTHER ACTIN 2 430 IPR004000 -
Gma08g00387 431 Gene3D Actin; Chain A, domain 4 196 309 - -
Gma08g00387 431 Gene3D - 377 431 - -
Gma08g00387 431 Gene3D - 3 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00387 Gma-Chr8 3243177 3249991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00387 1 430 Miscellaneous Gene Families AT3G53750 35.335 1.23e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00387 K11340 - gmx:100819549 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00387 08 3243177 3249991 Gma08g00387 08 3243177 3249991 ECH